RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 EDDM13A0A1B0GTR0 161 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 PIPSLA2A3N6 862 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 PRNPP04156 253 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 CBLP22681 906 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 GJA4P35212 333 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 SLBPQ14493 270 aaKnown RBP eCLIP16■□□□□ 0.15
CMTM3-213ENST00000566756 ERAP2Q6P179 960 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 PNCKQ6P2M8 343 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 C19orf48Q6RUI8 117 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 ZNF852Q6ZMS4 543 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 NCCRP1Q6ZVX7 275 aaPredicted RBP16■□□□□ 0.15
CMTM3-213ENST00000566756 LYSMD2Q8IV50 215 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 STX19Q8N4C7 294 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 TMIEQ8NEW7 156 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 AP2M1Q96CW1 435 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 RIPOR3Q96MK2 946 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 ZCCHC2Q9C0B9 1178 aaKnown RBP16■□□□□ 0.15
CMTM3-213ENST00000566756 ACER3Q9NUN7 267 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 IMPAD1Q9NX62 359 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 SCHIP1Q9P0W5 487 aaPredicted RBP16■□□□□ 0.15
CMTM3-213ENST00000566756 ANKMY1Q9P2S6 941 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 WBP11Q9Y2W2 641 aaKnown RBP16■□□□□ 0.15
CMTM3-213ENST00000566756 ETV6P41212 452 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 CDC42P60953 191 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 KHDRBS1Q07666 443 aaKnown RBP eCLIP16■□□□□ 0.15
CMTM3-213ENST00000566756 C2orf80Q0P641 193 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 KRR1Q13601 381 aaKnown RBP16■□□□□ 0.15
CMTM3-213ENST00000566756 TIMM50Q3ZCQ8 353 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 ANGPTL8Q6UXH0 198 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 Q6ZPB1 254 aaPredicted RBP16■□□□□ 0.15
CMTM3-213ENST00000566756 SLC22A16Q86VW1 577 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 SYTL1Q8IYJ3 562 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 OR4K1Q8NGD4 311 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 OR9A1PQ8NGU1 263 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 SETD7Q8WTS6 366 aaKnown RBP16■□□□□ 0.15
CMTM3-213ENST00000566756 NIPSNAP1Q9BPW8 284 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 TMEM245Q9H330 911 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 MTG2Q9H4K7 406 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 PRM3Q9NNZ6 103 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 RLIMQ9NVW2 624 aa16■□□□□ 0.15
CMTM3-213ENST00000566756 FAM32AQ9Y421 112 aaKnown RBP16■□□□□ 0.15
CMTM3-213ENST00000566756 PCM1Q15154 2024 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 PRAMEF25A6NGN4 478 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 CACNB4O00305 520 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-213ENST00000566756 TBX19O60806 448 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 CCNB2O95067 398 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 SNX4O95219 450 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 OPN1SWP03999 348 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 ELFN1P0C7U0 828 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 PIPP12273 146 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-213ENST00000566756 PDHA2P29803 388 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 SERPINB1P30740 379 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 IDH2P48735 452 aaKnown RBP15.99■□□□□ 0.15
CMTM3-213ENST00000566756 RGS6P49758 472 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 EIF2B2P49770 351 aaKnown RBP15.99■□□□□ 0.15
CMTM3-213ENST00000566756 ZNF234Q14588 700 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 MPEG1Q2M385 716 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 FNDC3BQ53EP0 1204 aaKnown RBP15.99■□□□□ 0.15
CMTM3-213ENST00000566756 C9orf64Q5T6V5 341 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 NXPE4Q6UWF7 544 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 LRRC56Q8IYG6 542 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-213ENST00000566756 LILRA3Q8N6C8 439 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-213ENST00000566756 SLC5A11Q8WWX8 675 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 LINC00615Q96LM1 132 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-213ENST00000566756 GULP1Q9UBP9 304 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 FAM8A1Q9UBU6 413 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 KCND3Q9UK17 655 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 PNMA8BQ9ULN7 279 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-213ENST00000566756 DUSP12Q9UNI6 340 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 ZNF451Q9Y4E5 1061 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 PEX16Q9Y5Y5 336 aa15.99■□□□□ 0.15
CMTM3-213ENST00000566756 C17orf113A0A1B0GUU1 675 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 ZAR1LA6NP61 321 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 PTTG1O95997 202 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 EIF2S1P05198 315 aaKnown RBP15.98■□□□□ 0.15
CMTM3-213ENST00000566756 STSP08842 583 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 DDX5P17844 614 aaKnown RBP15.98■□□□□ 0.15
CMTM3-213ENST00000566756 UQCRC2P22695 453 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 S100A5P33763 92 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 CHI3L1P36222 383 aaPredicted RBP15.98■□□□□ 0.15
CMTM3-213ENST00000566756 ST3GAL4Q11206 333 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 DNASE1L3Q13609 305 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 ELAVL3Q14576 367 aaKnown RBP15.98■□□□□ 0.15
CMTM3-213ENST00000566756 SLC5A12Q1EHB4 618 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 ZNF765Q7L2R6 523 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 SLC44A2Q8IWA5 706 aaPredicted RBP15.98■□□□□ 0.15
CMTM3-213ENST00000566756 OR8D1Q8WZ84 308 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 FOXJ1Q92949 421 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 DTD2Q96FN9 168 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 COQ10AQ96MF6 247 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 CDADC1Q9BWV3 514 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 RACGAP1Q9H0H5 632 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 ZNF576Q9H609 170 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 GPR83Q9NYM4 423 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 FTSJ1Q9UET6 329 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 PNMA8CA0A1B0GUJ8 204 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 A0A1W2PRB8 838 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 TBC1D3BA6NDS4 549 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 DSCR3O14972 297 aa15.98■□□□□ 0.15
CMTM3-213ENST00000566756 KDM1AO60341 852 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms