RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 LIPCP11150 499 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 COX4I1P13073 169 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 IL1RNP18510 177 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 ZNF10P21506 573 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-206ENST00000565990 IL10P22301 178 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 HIST1H1TP22492 207 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-206ENST00000565990 OR1D4P47884 311 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 MTTPP55157 894 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 SKP1P63208 163 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 RAE1P78406 368 aaKnown RBP11.93□□□□□ -0.5
SF3B3-206ENST00000565990 HMGCS1Q01581 520 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 RUNX2Q13950 521 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 DSG2Q14126 1118 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 AP5B1Q2VPB7 878 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 C1orf189Q5VU69 101 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 MRM1Q6IN84 353 aaKnown RBP11.93□□□□□ -0.5
SF3B3-206ENST00000565990 ZNF793Q6ZN11 406 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 ACAD11Q709F0 780 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 COX15Q7KZN9 410 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 DHDDSQ86SQ9 333 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 ESX1Q8N693 406 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 ACOT4Q8N9L9 421 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 OR2T11Q8NH01 316 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 AGR3Q8TD06 166 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 ZFAND2BQ8WV99 257 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-206ENST00000565990 NRG4Q8WWG1 115 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 MMABQ96EY8 250 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-206ENST00000565990 APIPQ96GX9 242 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 HBEGFQ99075 208 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 ECSITQ9BQ95 431 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 C17orf62Q9BQA9 187 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 EBF4Q9BQW3 602 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 MRPL1Q9BYD6 325 aaKnown RBP11.93□□□□□ -0.5
SF3B3-206ENST00000565990 MEAF6Q9HAF1 191 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 LYRM4Q9HD34 91 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 NDUFA13Q9P0J0 144 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 C6orf203Q9P0P8 240 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-206ENST00000565990 MAP4K5Q9Y4K4 846 aa11.93□□□□□ -0.5
SF3B3-206ENST00000565990 A0A0A6YYD5 115 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 TRPC5OSA6NMA1 111 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 SGK494L7N484 410 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 SAP18O00422 153 aaKnown RBP11.92□□□□□ -0.5
SF3B3-206ENST00000565990 LSM1O15116 133 aaKnown RBP11.92□□□□□ -0.5
SF3B3-206ENST00000565990 CHST10O43529 356 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 RAD1O60671 282 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 SH3BGRLO75368 114 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 PRR35P0CG20 571 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 KITP10721 976 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 TPP2P29144 1249 aaPredicted RBP11.92□□□□□ -0.5
SF3B3-206ENST00000565990 KLF10Q13118 480 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 SLAMF1Q13291 335 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 SMU1Q2TAY7 513 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 RFTN2Q52LD8 501 aaPredicted RBP11.92□□□□□ -0.5
SF3B3-206ENST00000565990 SPIN4Q56A73 249 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 IRAK1BP1Q5VVH5 260 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 TMEM154Q6P9G4 183 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 FAM199XQ6PEV8 388 aaPredicted RBP11.92□□□□□ -0.5
SF3B3-206ENST00000565990 FBXW8Q8N3Y1 598 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 SNIP1Q8TAD8 396 aaKnown RBP11.92□□□□□ -0.5
SF3B3-206ENST00000565990 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.92□□□□□ -0.54e-13■■■□□ 19
SF3B3-206ENST00000565990 ZCCHC10Q8TBK6 192 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 COL26A1Q96A83 441 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 FKBP10Q96AY3 582 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 MAELQ96JY0 434 aaKnown RBP11.92□□□□□ -0.5
SF3B3-206ENST00000565990 FCRL1Q96LA6 429 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 GPR87Q9BY21 358 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 CHST8Q9H2A9 424 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 WDR54Q9H977 334 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 TCF7L2Q9NQB0 619 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 C1orf109Q9NX04 203 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 MARCOQ9UEW3 520 aaPredicted RBP11.92□□□□□ -0.5
SF3B3-206ENST00000565990 NDOR1Q9UHB4 597 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 DAPP1Q9UN19 280 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 FIS1Q9Y3D6 152 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 ASB4Q9Y574 426 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 PTGDR2Q9Y5Y4 395 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 MAU2Q9Y6X3 613 aa11.92□□□□□ -0.5
SF3B3-206ENST00000565990 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.92□□□□□ -0.5
SF3B3-206ENST00000565990 NUP210LQ5VU65 1888 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 ASPMQ8IZT6 3477 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 FREM2Q5SZK8 3169 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 RTCAO00442 366 aaKnown RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 CYR61O00622 381 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 TLX3O43711 291 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 B3GALT2O43825 422 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 VPS4BO75351 444 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 RDH16O75452 317 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 EEDO75530 441 aaKnown RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 KLF7O75840 302 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 KLK1P06870 262 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 LINGO3P0C6S8 592 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 ACPPP15309 386 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 STAT5AP42229 794 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 HSPA13P48723 471 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 LIM2P55344 173 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 TRA2BP62995 288 aaKnown RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 UBAP2LQ14157 1087 aaKnown RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 MAPRE2Q15555 327 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 NKG7Q16617 165 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms