RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 GUCY2DQ02846 1103 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 PAX8Q06710 450 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 COX10Q12887 443 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 LY6DQ14210 128 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 PDIA5Q14554 519 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 SLMAPQ14BN4 828 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 HIGD2BQ4VC39 106 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 ARMC4Q5T2S8 1044 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 BEND3Q5T5X7 828 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 LCN1P1Q5VSP4 162 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 ARMCX5Q6P1M9 558 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 TRAT1Q6PIZ9 186 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 CCDC121Q6ZUS5 278 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 G2E3Q7L622 706 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 ARHGAP22Q7Z5H3 698 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 AACSQ86V21 672 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 CFAP206Q8IYR0 622 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 CEP57L1Q8IYX8 460 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 POM121L12Q8N7R1 296 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 Q8NBF4 154 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 MSANTD4Q8NCY6 345 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 NPEPL1Q8NDH3 523 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 C17orf47Q8NEP4 570 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 OR5M8Q8NGP6 311 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 LRRC15Q8TF66 581 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 CCDC12Q8WUD4 166 aaPredicted RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 CCDC47Q96A33 483 aaKnown RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 HDAC11Q96DB2 347 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 DTNBP1Q96EV8 351 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 C10orf90Q96M02 699 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 PRICKLE1Q96MT3 831 aaPredicted RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 ZNF396Q96N95 335 aaPredicted RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 LRRC3BQ96PB8 259 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 GBP5Q96PP8 586 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 CITED2Q99967 270 aaPredicted RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 URM1Q9BTM9 101 aaKnown RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 MRPL9Q9BYD2 267 aaKnown RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 UPF3BQ9BZI7 483 aaKnown RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 API5Q9BZZ5 524 aaKnown RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 OR2B2Q9GZK3 357 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 YIPF3Q9GZM5 350 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 PPIL3Q9H2H8 161 aaKnown RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 DPAGT1Q9H3H5 408 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 OPA3Q9H6K4 179 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 TDRD3Q9H7E2 651 aaKnown RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 VCPKMTQ9H867 229 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 MAN2C1Q9NTJ4 1040 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 IFNKQ9P0W0 207 aa3.49□□□□□ -1.85
CHD9-212ENST00000564641 DDX25Q9UHL0 483 aaKnown RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 HOOK1Q9UJC3 728 aaKnown RBP3.49□□□□□ -1.85
CHD9-212ENST00000564641 ADAMTS9Q9P2N4 1935 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 SALL1Q9NSC2 1324 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 IGLV3-10A0A075B6K4 115 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 A0A087WV48 116 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 CTAGE15A4D2H0 777 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 URADA6NGE7 173 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 ASB14A6NK59 587 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 PDHXO00330 501 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 NDUFAB1O14561 156 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 EIF3HO15372 352 aaKnown RBP eCLIP3.48□□□□□ -1.85
CHD9-212ENST00000564641 SMIM24O75264 130 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 HMMRO75330 724 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 HPRP00739 348 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 ASNSP08243 561 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 RHOXF2BP0C7M4 288 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 ATP6V1B1P15313 513 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 ERCC2P18074 760 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 ITIH1P19827 911 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 HSPA4P34932 840 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 TCF7P36402 384 aaPredicted RBP3.48□□□□□ -1.85
CHD9-212ENST00000564641 RPL21P46778 160 aaKnown RBP3.48□□□□□ -1.85
CHD9-212ENST00000564641 GYG1P46976 350 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 CCNA1P78396 465 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 DYNC1I2Q13409 638 aaKnown RBP3.48□□□□□ -1.85
CHD9-212ENST00000564641 ODF4Q2M2E3 257 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 TYSND1Q2T9J0 566 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 RABL6Q3YEC7 729 aaPredicted RBP3.48□□□□□ -1.85
CHD9-212ENST00000564641 ELFN2Q5R3F8 820 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 PLBD1Q6P4A8 553 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 CCDC73Q6ZRK6 1079 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 C11orf57Q6ZUT1 292 aaPredicted RBP3.48□□□□□ -1.85
CHD9-212ENST00000564641 FAM47EQ6ZV65 393 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 SPATA21Q7Z572 469 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 CAMKMTQ7Z624 323 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 CTAGE6Q86UF2 777 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 SNX32Q86XE0 403 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 CCDC83Q8IWF9 413 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 CCDC170Q8IYT3 715 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 TEX9Q8N6V9 391 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 CCDC148Q8NFR7 591 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 OR8K1Q8NGG5 319 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 OR2AJ1Q8NGZ0 328 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 GDAP1Q8TB36 358 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 FAM81AQ8TBF8 368 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 DHX58Q96C10 678 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 SLC45A3Q96JT2 553 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 ALS2CR12Q96Q35 445 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 TSC22D3Q99576 134 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 NKX3-1Q99801 234 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms