RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 MS4A8Q9BY19 250 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 ALOXE3Q9BYJ1 711 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 TSPAN10Q9H1Z9 355 aaPredicted RBP13.97□□□□□ -0.17
SPG7-210ENST00000564409 ALG9Q9H6U8 611 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 MS4A12Q9NXJ0 267 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 KCMF1Q9P0J7 381 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 MYOTQ9UBF9 498 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 DNAJC13O75165 2243 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 A0A087X1B8 175 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 PEX1O43933 1283 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 WISP2O76076 250 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 EPB42P16452 691 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 EPORP19235 508 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 HIST1H1TP22492 207 aaPredicted RBP13.96□□□□□ -0.17
SPG7-210ENST00000564409 ATP5A1P25705 553 aaKnown RBP13.96□□□□□ -0.17
SPG7-210ENST00000564409 TNFRSF8P28908 595 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 PIK3CBP42338 1070 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 MEOX1P50221 254 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 ST13P50502 369 aaKnown RBP13.96□□□□□ -0.17
SPG7-210ENST00000564409 HNRNPFP52597 415 aaKnown RBP13.96□□□□□ -0.17
SPG7-210ENST00000564409 GUCY2DQ02846 1103 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 SLMAPQ14BN4 828 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 FAM83EQ2M2I3 478 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 RNFT1Q5M7Z0 435 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 METTL2BQ6P1Q9 378 aaKnown RBP13.96□□□□□ -0.17
SPG7-210ENST00000564409 PAOXQ6QHF9 649 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 RGS9BPQ6ZS82 235 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 CEP128Q6ZU80 1094 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 CCDC25Q86WR0 208 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 DOLPP1Q86YN1 238 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 MCEMP1Q8IX19 187 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 ACOT4Q8N9L9 421 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 TMEM52Q8NDY8 209 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 OR5L2Q8NGL0 311 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 FBF1Q8TES7 1133 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 ESAMQ96AP7 390 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 ZNF223Q9UK11 482 aaPredicted RBP13.96□□□□□ -0.17
SPG7-210ENST00000564409 ERVK-11Q9UQG0 969 aa13.96□□□□□ -0.17
SPG7-210ENST00000564409 A8MVJ9 347 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 SUPT3HB4E1H0 165 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 TGFBR3LH3BV60 316 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 DYRK3O43781 588 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 SUPT3HO75486 399 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 CLDN14O95500 239 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 COX7A2P14406 83 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 COX6B1P14854 86 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 PPP2R1BP30154 601 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 FBXO48Q5FWF7 155 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 KHDRBS2Q5VWX1 349 aaKnown RBP13.95□□□□□ -0.18
SPG7-210ENST00000564409 LIPJQ5W064 366 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 GRHL2Q6ISB3 625 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 ZDHHC24Q6UX98 284 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 GDF7Q7Z4P5 450 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 UBE3DQ7Z6J8 389 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 CHERPQ8IWX8 916 aaKnown RBP13.95□□□□□ -0.18
SPG7-210ENST00000564409 PSD4Q8NDX1 1056 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 OR7G3Q8NG95 312 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 AGAP11Q8TF27 550 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 PTPMT1Q8WUK0 201 aaPredicted RBP13.95□□□□□ -0.18
SPG7-210ENST00000564409 ASB15Q8WXK1 588 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 EXT2Q93063 718 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 RGMAQ96B86 450 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 REPS1Q96D71 796 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 SGCZQ96LD1 299 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 TSPYL1Q9H0U9 437 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 PLSCR2Q9NRY7 297 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 IGSF5Q9NSI5 407 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 HPF1Q9NWY4 346 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 COPS7AQ9UBW8 275 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 ASB1Q9Y576 335 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 PCDHGA11Q9Y5H2 935 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 ZNF407Q9C0G0 2248 aa13.95□□□□□ -0.18
SPG7-210ENST00000564409 EML6Q6ZMW3 1958 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 ABCA12Q86UK0 2595 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 TMEM200CA6NKL6 621 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 UGDHO60701 494 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 OR2J2O76002 312 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 PCNAP12004 261 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 TNNI3P19429 210 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 TLX1P31314 330 aaPredicted RBP13.94□□□□□ -0.18
SPG7-210ENST00000564409 PHBP35232 272 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 PTGS2P35354 604 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 SSR2P43308 183 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 PIK3CGP48736 1102 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 PHEXP78562 749 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 IGLV3-21P80748 117 aaPredicted RBP13.94□□□□□ -0.18
SPG7-210ENST00000564409 CKAP4Q07065 602 aaKnown RBP13.94□□□□□ -0.18
SPG7-210ENST00000564409 DLG1Q12959 904 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 ACAP2Q15057 778 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 DEPDC1Q5TB30 811 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 TMEM211Q6ICI0 200 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 OR4C11Q6IEV9 310 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 ADNP2Q6IQ32 1131 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 ARHGAP11AQ6P4F7 1023 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 KLC3Q6P597 504 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 OPN5Q6U736 354 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 CLNKQ7Z7G1 428 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 CMC1Q7Z7K0 106 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 GOLM1Q8NBJ4 401 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 FAM57AQ8TBR7 257 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms