RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 MEOX1P50221 254 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 SERPINB8P50452 374 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 GPR85P60893 370 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 ELAVL1Q15717 326 aaKnown RBP16.47■□□□□ 0.23
NME3-205ENST00000563854 WHAMMP3Q1A5X7 153 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 TMEM35AQ53FP2 167 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 GRHL2Q6ISB3 625 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 KLC3Q6P597 504 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 CHSY3Q70JA7 882 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 MRGPRGQ86SM5 289 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 TMEM132CQ8N3T6 1108 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 ACOT4Q8N9L9 421 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 OR7G3Q8NG95 312 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 ITLN2Q8WWU7 325 aaPredicted RBP16.47■□□□□ 0.23
NME3-205ENST00000563854 ALOXE3Q9BYJ1 711 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 OR8D2Q9GZM6 311 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 ACTR8Q9H981 624 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 LYRM4Q9HD34 91 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 ERVK-11Q9UQG0 969 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 KLF13Q9Y2Y9 288 aaPredicted RBP16.47■□□□□ 0.23
NME3-205ENST00000563854 NOTCH2Q04721 2471 aa16.47■□□□□ 0.23
NME3-205ENST00000563854 HMX2A2RU54 273 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 TFECO14948 347 aaPredicted RBP16.46■□□□□ 0.23
NME3-205ENST00000563854 ASNA1O43681 348 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 CTNSO60931 367 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 ACSL3O95573 720 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 MTHFD2P13995 350 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 HIST1H1TP22492 207 aaPredicted RBP16.46■□□□□ 0.23
NME3-205ENST00000563854 SSR4P51571 173 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 SETDB1Q15047 1291 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 KRTCAP3Q53RY4 240 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 RNFT1Q5M7Z0 435 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 KHDRBS2Q5VWX1 349 aaKnown RBP16.46■□□□□ 0.23
NME3-205ENST00000563854 MTFR2Q6P444 385 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 SIAH3Q8IW03 269 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 LAS2Q8IYD9 372 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 GHDCQ8N2G8 530 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 IFT81Q8WYA0 676 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 DAZLQ92904 295 aaKnown RBP16.46■□□□□ 0.23
NME3-205ENST00000563854 CMTM7Q96FZ5 175 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 MTERF1Q99551 399 aaKnown RBP16.46■□□□□ 0.23
NME3-205ENST00000563854 KCMF1Q9P0J7 381 aa16.46■□□□□ 0.23
NME3-205ENST00000563854 C17orf105B2RV13 164 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 WWP2O00308 870 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 CDK2AP1O14519 115 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 CDC40O60508 579 aaKnown RBP eCLIP16.45■□□□□ 0.22
NME3-205ENST00000563854 OR2J2O76002 312 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 KLHL2O95198 593 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 SERPINB1P30740 379 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 NAA30Q147X3 362 aaPredicted RBP16.45■□□□□ 0.22
NME3-205ENST00000563854 ACAP2Q15057 778 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 HSDL2Q6YN16 418 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 MDGA2Q7Z553 956 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 CCDC91Q7Z6B0 441 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 SPPL2CQ8IUH8 684 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 SULF2Q8IWU5 870 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 ZNF321PQ8N8H1 164 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 OR14A16Q8NHC5 309 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 HUS1BQ8NHY5 278 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 RHEBL1Q8TAI7 183 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 ASB15Q8WXK1 588 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 CENPKQ9BS16 269 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 CDC42EP4Q9H3Q1 356 aaKnown RBP16.45■□□□□ 0.22
NME3-205ENST00000563854 ACSS3Q9H6R3 686 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 TRIM45Q9H8W5 580 aaPredicted RBP16.45■□□□□ 0.22
NME3-205ENST00000563854 DMRT3Q9NQL9 472 aa16.45■□□□□ 0.22
NME3-205ENST00000563854 SYNDIG1LA6NDD5 238 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 A8MVJ9 347 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 KLRC4-KLRK1H3BQV0 150 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 PEX1O43933 1283 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 SIX3O95343 332 aaPredicted RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 ALDOAP04075 364 aaKnown RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 INHBAP08476 426 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 PTGER1P34995 402 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 GPR143P51810 404 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 ALDH18A1P54886 795 aaKnown RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 RPS13P62277 151 aaKnown RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 PHEXP78562 749 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 SLAMF1Q13291 335 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 GTF2H2Q13888 395 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 SERTAD2Q14140 314 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 E2F2Q14209 437 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 CRYBG3Q68DQ2 2970 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 SP5Q6BEB4 398 aaPredicted RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 OR4C11Q6IEV9 310 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 GTF2H2CQ6P1K8 395 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 IL20RBQ6UXL0 311 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 RPTNQ6XPR3 784 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 CEP128Q6ZU80 1094 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 NCCRP1Q6ZVX7 275 aaPredicted RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 GOLGA7Q7Z5G4 137 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 OR4N5Q8IXE1 308 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 ARMC10Q8N2F6 343 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 ZNF808Q8N4W9 903 aaPredicted RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 NOA1Q8NC60 698 aaKnown RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 UHMK1Q8TAS1 419 aaKnown RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 PTPMT1Q8WUK0 201 aaPredicted RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 MARVELD3Q96A59 401 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 RGMAQ96B86 450 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 SCYL1Q96KG9 808 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms