RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 EPHA4P54764 986 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 MANFP55145 182 aaKnown RBP17.09■□□□□ 0.33
COMMD4-208ENST00000563220 RUNX2Q13950 521 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 C16orf72Q14CZ0 275 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 RGNQ15493 299 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 ADRM1Q16186 407 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 MANEAQ5SRI9 462 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 TMEM214Q6NUQ4 689 aaKnown RBP17.09■□□□□ 0.33
COMMD4-208ENST00000563220 ZCCHC8Q6NZY4 707 aaKnown RBP17.09■□□□□ 0.33
COMMD4-208ENST00000563220 CEP68Q76N32 757 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 KANSL1Q7Z3B3 1105 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 MCATQ8IVS2 390 aaKnown RBP17.09■□□□□ 0.33
COMMD4-208ENST00000563220 DNAJC22Q8N4W6 341 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 NATD1Q8N6N6 113 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 TNIP2Q8NFZ5 429 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 OR5P2Q8WZ92 322 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 TGM7Q96PF1 710 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 DPH2Q9BQC3 489 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-208ENST00000563220 SLC35A5Q9BS91 424 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 CXorf36Q9H7Y0 433 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 C6orf203Q9P0P8 240 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-208ENST00000563220 RIMS3Q9UJD0 308 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 ACSL6Q9UKU0 697 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 CES1P1Q9UKY3 287 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 AURKCQ9UQB9 309 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 LRCH1Q9Y2L9 728 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 CXCR6O00574 342 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 B4GAT1O43505 415 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 GUCY1B2O75343 617 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 ALOX12P18054 663 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 IL1RNP18510 177 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 POLE2P56282 527 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 MRPS35P82673 323 aaKnown RBP17.08■□□□□ 0.33
COMMD4-208ENST00000563220 HLA-BQ31612 363 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.08■□□□□ 0.33
COMMD4-208ENST00000563220 PEAR1Q5VY43 1037 aaPredicted RBP17.08■□□□□ 0.33
COMMD4-208ENST00000563220 LPCAT4Q643R3 524 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 CPZQ66K79 652 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 ABHD13Q7L211 337 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 PRSS41Q7RTY9 318 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 PTOV1Q86YD1 416 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 OR5AK3PQ8NH89 298 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 LRTOMTQ8WZ04 291 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 KLHL6Q8WZ60 621 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 TMEM121BQ9BXQ6 578 aaPredicted RBP17.08■□□□□ 0.33
COMMD4-208ENST00000563220 RAB33BQ9H082 229 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 CHST8Q9H2A9 424 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 SLC35C2Q9NQQ7 365 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 ARMC1Q9NVT9 282 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 LYARQ9NX58 379 aaKnown RBP17.08■□□□□ 0.33
COMMD4-208ENST00000563220 KCMF1Q9P0J7 381 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 EPHA6Q9UF33 1036 aa17.08■□□□□ 0.33
COMMD4-208ENST00000563220 CACNA1EQ15878 2313 aa17.08■□□□□ 0.32
COMMD4-208ENST00000563220 CABIN1Q9Y6J0 2220 aa17.08■□□□□ 0.32
COMMD4-208ENST00000563220 IGHV1OR21-1A0A087WYE8 117 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 IGHV5-51A0A0C4DH38 117 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 A6NHS1 94 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 CASQ2O14958 399 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-208ENST00000563220 NUDT7P0C024 238 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 GLB1P16278 677 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 PPIBP23284 216 aaKnown RBP17.07■□□□□ 0.32
COMMD4-208ENST00000563220 CASP9P55211 416 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 CFHR1Q03591 330 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 COX20Q5RI15 118 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 ZZZ3Q8IYH5 903 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 SHISA5Q8N114 240 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 ZNF655Q8N720 491 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-208ENST00000563220 TRIML2Q8N7C3 387 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 TMEM102Q8N9M5 508 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-208ENST00000563220 NETO1Q8TDF5 533 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 TCTN2Q96GX1 697 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 SERINC2Q96SA4 455 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 CCDC3Q9BQI4 270 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 ROGDIQ9GZN7 287 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 BDP1A6H8Y1 2624 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 NCOR1O75376 2440 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 GMNNO75496 209 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 CREG1O75629 220 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 GPIP06744 558 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 DDX5P17844 614 aaKnown RBP17.07■□□□□ 0.32
COMMD4-208ENST00000563220 LRRC36Q1X8D7 754 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 ZNF750Q32MQ0 723 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 IRAK1BP1Q5VVH5 260 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 SLC48A1Q6P1K1 146 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 PDSS2Q86YH6 399 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 APLFQ8IW19 511 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-208ENST00000563220 KBTBD2Q8IY47 623 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 SAP25Q8TEE9 199 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 GLIPR2Q9H4G4 154 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 EPS8L2Q9H6S3 715 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 SIRT3Q9NTG7 399 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-208ENST00000563220 ACSS1Q9NUB1 689 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-208ENST00000563220 NLGN3Q9NZ94 848 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 V9GYQ6 96 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 A0A0C4DFX4 3053 aa17.07■□□□□ 0.32
COMMD4-208ENST00000563220 A0A1W2PS29 197 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 PATE3B3GLJ2 98 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 CASC3O15234 703 aaKnown RBP17.06■□□□□ 0.32
COMMD4-208ENST00000563220 ERAL1O75616 437 aaKnown RBP17.06■□□□□ 0.32
COMMD4-208ENST00000563220 TIPRLO75663 272 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms