RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 SIDT2Q8NBJ9 832 aaKnown RBP4.6□□□□□ -1.67
LINC00557-201ENST00000563184 MIPOL1Q8TD10 442 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 UBTD2Q8WUN7 234 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 CFAP36Q96G28 342 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 ATP6V0BQ99437 205 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 S1PR3Q99500 378 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 LRRC61Q9BV99 259 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 ACAT2Q9BWD1 397 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 MED17Q9NVC6 651 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 ERVK-19Q9WJR5 959 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 TEX264Q9Y6I9 313 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 PRSS21Q9Y6M0 314 aa4.6□□□□□ -1.67
LINC00557-201ENST00000563184 IQCMA0A1B0GVH7 501 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 TRIM64A6NGJ6 449 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 TRIM64BA6NI03 449 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 DDX39AO00148 427 aaKnown RBP4.59□□□□□ -1.67
LINC00557-201ENST00000563184 ZNF749O43361 778 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 KERAO60938 352 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 GAS8O95995 478 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 EZRP15311 586 aaKnown RBP4.59□□□□□ -1.67
LINC00557-201ENST00000563184 GPX3P22352 226 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 FHITP49789 147 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 FKBP3Q00688 224 aaKnown RBP4.59□□□□□ -1.67
LINC00557-201ENST00000563184 UBXN1Q04323 297 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 AP1B1Q10567 949 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 MEF2DQ14814 521 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 ZNF146Q15072 292 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 STX1AQ16623 288 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 KNOP1Q1ED39 458 aaKnown RBP4.59□□□□□ -1.67
LINC00557-201ENST00000563184 GLIPR1L2Q4G1C9 344 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 ZNF410Q86VK4 478 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 FAM131BQ86XD5 332 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 CCDC197Q8NCU1 140 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 GANCQ8TET4 914 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 LRRC15Q8TF66 581 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 AGPAT1Q99943 283 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 RBM4BQ9BQ04 359 aaKnown RBP4.59□□□□□ -1.67
LINC00557-201ENST00000563184 TRIM51Q9BSJ1 452 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 TRIM15Q9C019 465 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 TRIM7Q9C029 511 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 APPL1Q9UKG1 709 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 EXOC7Q9UPT5 735 aa4.59□□□□□ -1.67
LINC00557-201ENST00000563184 A0A1B0GU03 582 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 K7EQG2 157 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 LYNP07948 512 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 UGT1A6P19224 532 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 FCGR2BP31994 310 aaPredicted RBP4.58□□□□□ -1.68
LINC00557-201ENST00000563184 FCGR2CP31995 323 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 CRYBA2P53672 197 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 YBEYP58557 167 aaPredicted RBP4.58□□□□□ -1.68
LINC00557-201ENST00000563184 RBBP4Q09028 425 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 ELAVL2Q12926 359 aaKnown RBP4.58□□□□□ -1.68
LINC00557-201ENST00000563184 RIGQ13278 110 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 WSCD2Q2TBF2 565 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 MS4A18Q3C1V0 323 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
LINC00557-201ENST00000563184 ZNF343Q6P1L6 599 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 ALKBH5Q6P6C2 394 aaKnown RBP4.58□□□□□ -1.68
LINC00557-201ENST00000563184 B3GLCTQ6Y288 498 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 FBXW8Q8N3Y1 598 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 PSMA8Q8TAA3 256 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 PCED1BQ96HM7 432 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 SLC45A3Q96JT2 553 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 DPEP3Q9H4B8 488 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 KCNK13Q9HB14 408 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 PLEKHA3Q9HB20 300 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 ZCCHC3Q9NUD5 404 aaKnown RBP4.58□□□□□ -1.68
LINC00557-201ENST00000563184 COMMD8Q9NX08 183 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 TECRQ9NZ01 308 aaKnown RBP4.58□□□□□ -1.68
LINC00557-201ENST00000563184 MUTYHQ9UIF7 546 aa4.58□□□□□ -1.68
LINC00557-201ENST00000563184 SH3PXD2BA1X283 911 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 OR5H15A6NDH6 313 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 ASB14A6NK59 587 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 ARHGEF33A8MVX0 844 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 E9PQ18 207 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 CCSO14618 274 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 CSDE1O75534 798 aaKnown RBP4.57□□□□□ -1.68
LINC00557-201ENST00000563184 SERPINB2P05120 415 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 GSTA2P09210 222 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 MMP10P09238 476 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 CD1DP15813 335 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 HEPACAMQ14CZ8 416 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 OR1C1Q15619 314 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 SNAI3Q3KNW1 292 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 C17orf64Q86WR6 236 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 Q8N377 158 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 OR6F1Q8NGZ6 308 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 OR4A16Q8NH70 328 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 SPPL2AQ8TCT8 520 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 MGARPQ8TDB4 240 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 CHPT1Q8WUD6 406 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 GLYATL1Q969I3 302 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 NABP1Q96AH0 204 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 MRPL53Q96EL3 112 aaKnown RBP4.57□□□□□ -1.68
LINC00557-201ENST00000563184 ALKBH3Q96Q83 286 aaPredicted RBP4.57□□□□□ -1.68
LINC00557-201ENST00000563184 GAL3ST4Q96RP7 486 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 RAB40CQ96S21 281 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 WWP1Q9H0M0 922 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 CXXC4Q9H2H0 198 aa4.57□□□□□ -1.68
LINC00557-201ENST00000563184 KCNMB3Q9NPA1 279 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms