RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 IGFBP2P18065 325 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 ACVR2AP27037 513 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 MAGEA5P43359 124 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 HSPA7P48741 367 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 HK2P52789 917 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 TFF3Q07654 80 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 FRG1Q14331 258 aaKnown RBP12.04□□□□□ -0.48
SF3B3-202ENST00000562722 TGFBIQ15582 683 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 HIST2H2ACQ16777 129 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-202ENST00000562722 HIST2H2AA3Q6FI13 130 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 ADNP2Q6IQ32 1131 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 ABHD17CQ6PCB6 329 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 B3GNT6Q6ZMB0 384 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 SYDE1Q6ZW31 735 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-202ENST00000562722 GPSM1Q86YR5 675 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 DMRTC2Q8IXT2 367 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-202ENST00000562722 CLYBLQ8N0X4 340 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 TCAIMQ8N3R3 496 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 FAM109AQ8N4B1 249 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 SPATA6LQ8N4H0 392 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 ZNF321PQ8N8H1 164 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 FBXO36Q8NEA4 188 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 OR5L2Q8NGL0 311 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 SCYL1Q96KG9 808 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 CAPZA3Q96KX2 299 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 F2RL3Q96RI0 385 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 TRIM31Q9BZY9 425 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 ROGDIQ9GZN7 287 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 PITHD1Q9GZP4 211 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-202ENST00000562722 NT5DC2Q9H857 520 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 ZDHHC11Q9H8X9 412 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 IL1RL2Q9HB29 575 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 SLC24A3Q9HC58 644 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 SACM1LQ9NTJ5 587 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 ALKBH4Q9NXW9 302 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 NSMCE4AQ9NXX6 385 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 TNFRSF10DQ9UBN6 386 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 COPS7AQ9UBW8 275 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 KCNN3Q9UGI6 736 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 ACAD8Q9UKU7 415 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 CLDN16Q9Y5I7 305 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 LIPGQ9Y5X9 500 aa12.04□□□□□ -0.48
SF3B3-202ENST00000562722 OR14I1A6ND48 311 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 CYR61O00622 381 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 ZSCAN12O43309 604 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 DIAPH2O60879 1101 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 LDB3O75112 727 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 SH3BGRLO75368 114 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 STK16O75716 305 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 KRT38O76015 456 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 HOXD4P09016 255 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-202ENST00000562722 COX7A2P14406 83 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 CNR1P21554 472 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 IVDP26440 423 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 KCNC1P48547 511 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 DNASE1L1P49184 302 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 MAN2A2P49641 1150 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 RNF4P78317 190 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 ID2Q02363 134 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 SERTAD2Q14140 314 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 PDK4Q16654 411 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 ADPRMQ3LIE5 342 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 PAGE2BQ5JRK9 111 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 OPN5Q6U736 354 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 VN1R5Q7Z5H4 357 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 TMEM251Q8N6I4 163 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 SLC2A12Q8TD20 617 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 PTPMT1Q8WUK0 201 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-202ENST00000562722 EXT2Q93063 718 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 PTCD3Q96EY7 689 aaKnown RBP12.03□□□□□ -0.48
SF3B3-202ENST00000562722 TSPAN17Q96FV3 270 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 SGCZQ96LD1 299 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 KCNC2Q96PR1 638 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 KRT12Q99456 494 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 TMEM79Q9BSE2 394 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 EFCAB11Q9BUY7 163 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 DERL2Q9GZP9 239 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 RHOJQ9H4E5 214 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 EHD1Q9H4M9 534 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 CAB39LQ9H9S4 337 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 POPDC3Q9HBV1 291 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 CD274Q9NZQ7 290 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 TXNDC16Q9P2K2 825 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 VTI1BQ9UEU0 232 aa12.03□□□□□ -0.48
SF3B3-202ENST00000562722 CELSR1Q9NYQ6 3014 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 TAPBPO15533 448 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 DYRK3O43781 588 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 KLK8O60259 260 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 CCNT2O60583 730 aaKnown RBP12.02□□□□□ -0.49
SF3B3-202ENST00000562722 PIAS1O75925 651 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 GLSO94925 669 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-202ENST00000562722 NADKO95544 446 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-202ENST00000562722 CCDC166P0CW27 439 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 PCNAP12004 261 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 TCP1P17987 556 aaKnown RBP12.02□□□□□ -0.49
SF3B3-202ENST00000562722 MSH2P43246 934 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 IRF8Q02556 426 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 LAPTM5Q13571 262 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 DOC2AQ14183 400 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 FASTKD3Q14CZ7 662 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms