RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 FAM58BPP0C7Q3 252 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 C8orf89P0DMQ9 161 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 OTX2P32243 289 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 ABCE1P61221 599 aaKnown RBP12.61□□□□□ -0.39
CDH1-204ENST00000562118 SLAMF1Q13291 335 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 TERF2Q15554 542 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 SPIN4Q56A73 249 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 CPZQ66K79 652 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 CLEC6AQ6EIG7 209 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 Q6ZSR9 355 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 PAGE2Q7Z2X7 111 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 ANKRD37Q7Z713 158 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 GPR180Q86V85 440 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 CLYBLQ8N0X4 340 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 FER1L6-AS2Q96M78 137 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 HBEGFQ99075 208 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 ADNPQ9H2P0 1102 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 NECTIN3Q9NQS3 549 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 AHSPQ9NZD4 102 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 PHF11Q9UIL8 331 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 MCM8Q9UJA3 840 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 FBXL4Q9UKA2 621 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 SLC12A4Q9UP95 1085 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 LHX6Q9UPM6 363 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 ATG4BQ9Y4P1 393 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 PCDHGA9Q9Y5G4 932 aaKnown RBP12.61□□□□□ -0.39
CDH1-204ENST00000562118 A0A1W2PR48 441 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 OR2W5A6NFC9 320 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 TMEM233B4DJY2 109 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 PRMT3O60678 531 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 CTNSO60931 367 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 SH3BGRLO75368 114 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 NEFHP12036 1026 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 ACPPP15309 386 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 BGNP21810 368 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 SERPINB3P29508 390 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 GSTM5P46439 218 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 RRADP55042 308 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 BTG2P78543 158 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 HMGCS1Q01581 520 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 OCRLQ01968 901 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 Q0VFX4 171 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 BST1Q10588 318 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 DEFB109BQ30KR1 87 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 SGO1Q5FBB7 561 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 LANCL3Q6ZV70 420 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 NDUFAF7Q7L592 441 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 CPEB2Q7Z5Q1 589 aaKnown RBP12.6□□□□□ -0.39
CDH1-204ENST00000562118 PRSS58Q8IYP2 241 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 KIRREL3Q8IZU9 778 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 C7orf57Q8NEG2 295 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 OR2T11Q8NH01 316 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 EXTL1Q92935 676 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 TSLPQ969D9 159 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 ANKRD9Q96BM1 317 aaPredicted RBP12.6□□□□□ -0.39
CDH1-204ENST00000562118 APIPQ96GX9 242 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 VPS50Q96JG6 964 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 UBL7Q96S82 380 aaPredicted RBP12.6□□□□□ -0.39
CDH1-204ENST00000562118 CCT7Q99832 543 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 RBCK1Q9BYM8 510 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 TRIM55Q9BYV6 548 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 ING2Q9H160 280 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 ZNF395Q9H8N7 513 aaPredicted RBP12.6□□□□□ -0.39
CDH1-204ENST00000562118 NKIRAS1Q9NYS0 192 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 C19orf25Q9UFG5 118 aaPredicted RBP12.6□□□□□ -0.39
CDH1-204ENST00000562118 CES1P1Q9UKY3 287 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 MRPS33Q9Y291 106 aaKnown RBP12.6□□□□□ -0.39
CDH1-204ENST00000562118 RAP2CQ9Y3L5 183 aa12.6□□□□□ -0.39
CDH1-204ENST00000562118 PSMD12O00232 456 aaPredicted RBP12.59□□□□□ -0.39
CDH1-204ENST00000562118 LSM1O15116 133 aaKnown RBP12.59□□□□□ -0.39
CDH1-204ENST00000562118 ATXN7O15265 892 aaPredicted RBP12.59□□□□□ -0.39
CDH1-204ENST00000562118 LYPLA1O75608 230 aaPredicted RBP12.59□□□□□ -0.39
CDH1-204ENST00000562118 CDC123O75794 336 aaPredicted RBP12.59□□□□□ -0.39
CDH1-204ENST00000562118 AIFM1O95831 613 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 PRR35P0CG20 571 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 MAOAP21397 527 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 TIA1P31483 386 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDH1-204ENST00000562118 SLC1A6P48664 564 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 GPR143P51810 404 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 POLE2P56282 527 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 AIMP2Q13155 320 aaKnown RBP12.59□□□□□ -0.39
CDH1-204ENST00000562118 BIKQ13323 160 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 MINDY4Q4G0A6 757 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 SH2D4BQ5SQS7 431 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 PLAG1Q6DJT9 500 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 RIPOR1Q6ZS17 1223 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 LRRC34Q8IZ02 419 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 ARMC10Q8N2F6 343 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 C1orf52Q8N6N3 182 aaKnown RBP12.59□□□□□ -0.39
CDH1-204ENST00000562118 ZNF781Q8N8C0 355 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 ANKRD42Q8N9B4 389 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 EXD3Q8N9H8 876 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 FAM47BQ8NA70 645 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 NFAM1Q8NET5 270 aaPredicted RBP12.59□□□□□ -0.39
CDH1-204ENST00000562118 DNAJB14Q8TBM8 379 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 TWIST2Q8WVJ9 160 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 TANKQ92844 425 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 C8orf44Q96CB5 159 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 TM4SF18Q96CE8 201 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 TUBB6Q9BUF5 446 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms