RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 SEL1L3Q68CR1 1132 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 TYW3Q6IPR3 259 aaKnown RBP6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 TMEM81Q6P7N7 255 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 CES3Q6UWW8 571 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 CLEC9AQ6UXN8 241 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 PLD3Q8IV08 490 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 Q8NA96 180 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 XXYLT1Q8NBI6 393 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 MCUQ8NE86 351 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 OR52H1Q8NGJ2 320 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 BLOC1S5Q8TDH9 187 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 LIN37Q96GY3 246 aaPredicted RBP6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 JMJD8Q96S16 334 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 NODALQ96S42 347 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 KIFC3Q9BVG8 833 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 HDHD5Q9BXW7 423 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 NIPAL2Q9H841 368 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 MRPL47Q9HD33 250 aaKnown RBP6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 ASNSD1Q9NWL6 643 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 EHD3Q9NZN3 535 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 PLAGL1Q9UM63 463 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 METTL15A6NJ78 407 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 KCNU1A8MYU2 1149 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 A8MZ25 164 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 E9PLN8 166 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 CXCL11O14625 94 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 ANGPT2O15123 496 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 MSH4O15457 936 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 SEPT4O43236 478 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 ASS1P00966 412 aaKnown RBP6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 KRT19P08727 400 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 FTH1P19P0C7X4 201 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 CYP2C8P10632 490 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 F8A1P23610 371 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 HOXA13P31271 388 aaPredicted RBP6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 AKT2P31751 481 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 CDKN2BP42772 138 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 STX5Q13190 355 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 CBFBQ13951 182 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 LRRC26Q2I0M4 334 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 C6orf141Q5SZD1 244 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 SFRP5Q5T4F7 317 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 TIGD3Q6B0B8 471 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 MOB3CQ70IA8 216 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 LIMS2Q7Z4I7 341 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 VASH2Q86V25 355 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 C8orf59Q8N0T1 100 aaPredicted RBP6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 TMEM199Q8N511 208 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 HJURPQ8NCD3 748 aaPredicted RBP6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 TRPV3Q8NET8 790 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 FAR1Q8WVX9 515 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 CPA5Q8WXQ8 436 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 WNT8BQ93098 351 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 LGALS12Q96DT0 336 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 C5orf30Q96GV9 206 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 ELMO2Q96JJ3 720 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 MYRFLQ96LU7 910 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 QRFPRQ96P65 431 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 APOL4Q9BPW4 351 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 VKORC1Q9BQB6 163 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 NUAK2Q9H093 628 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 ILKAPQ9H0C8 392 aaPredicted RBP6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 TOR3AQ9H497 397 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 ING3Q9NXR8 418 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 VAV3Q9UKW4 847 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 USP22Q9UPT9 525 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 PRELID3BQ9Y3B1 194 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 HSPE1-MOB4S4R3N1 261 aa6.44□□□□□ -1.38
TSPAN3-209ENST00000560715 IGLV3-22A0A075B6J6 115 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 OR6C70A6NIJ9 312 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 FAM90A8PA6NJQ4 464 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 CHADO15335 359 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 TPST1O60507 370 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 PRAMEF2O60811 474 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 SLC22A5O76082 557 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 MED26O95402 600 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 ALDOAP04075 364 aaKnown RBP6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 FAM90A13PP0C7W8 464 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 FAM90A24PP0C7X0 464 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 SPATA31C1P0DKV0 1188 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 TNNI3P19429 210 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 GALP22466 123 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 CD27P26842 260 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 PRKAR1BP31321 381 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 PREPP48147 710 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 GCLMP48507 274 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 SCNN1GP51170 649 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 TPMTP51580 245 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 ARHGDIBP52566 201 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 PRKAG1P54619 331 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 CYP4F2P78329 520 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 PIGFQ07326 219 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 TRAF3Q13114 568 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 SLAMF1Q13291 335 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 DDX39BQ13838 428 aaKnown RBP6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 CSHL1Q14406 222 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 TPRG1LQ5T0D9 272 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 LIN9Q5TKA1 542 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 NAPRTQ6XQN6 538 aa6.43□□□□□ -1.38
TSPAN3-209ENST00000560715 MON1BQ7L1V2 547 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms