RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 NADK2Q4G0N4 442 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 B3GNTL1Q67FW5 361 aaPredicted RBP17.54■□□□□ 0.4
CASC4-209ENST00000559222 RIPOR1Q6ZS17 1223 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 SIRT6Q8N6T7 355 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 MYRIPQ8NFW9 859 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 METTL6Q8TCB7 284 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 BRIX1Q8TDN6 353 aaKnown RBP17.54■□□□□ 0.4
CASC4-209ENST00000559222 ACPTQ9BZG2 426 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 ROGDIQ9GZN7 287 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 TEX10Q9NXF1 929 aaPredicted RBP17.54■□□□□ 0.4
CASC4-209ENST00000559222 PSD3Q9NYI0 1048 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 SNX6Q9UNH7 406 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 ASB4Q9Y574 426 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 PTGDR2Q9Y5Y4 395 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 SPENQ96T58 3664 aaKnown RBP17.54■□□□□ 0.4
CASC4-209ENST00000559222 TRIM13O60858 407 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 SEMA3DO95025 777 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 SFTPCP11686 197 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 CPN2P22792 545 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 HMGCS1Q01581 520 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 CASP8Q14790 479 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 BTBD16Q32M84 506 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 CFAP157Q5JU67 520 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 VWA5B1Q5TIE3 1220 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 CLEC6AQ6EIG7 209 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 COMMD6Q7Z4G1 85 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 OR4N5Q8IXE1 308 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 KBTBD2Q8IY47 623 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 MMP21Q8N119 569 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 METTL4Q8N3J2 472 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 ZCCHC7Q8N3Z6 543 aaKnown RBP17.53■□□□□ 0.4
CASC4-209ENST00000559222 KIF2BQ8N4N8 673 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 RBMXL3Q8N7X1 1067 aaKnown RBP17.53■□□□□ 0.4
CASC4-209ENST00000559222 ANKRD9Q96BM1 317 aaPredicted RBP17.53■□□□□ 0.4
CASC4-209ENST00000559222 PGM2Q96G03 612 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 TUBB6Q9BUF5 446 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 MFRPQ9BY79 579 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 LHPPQ9H008 270 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 DDX31Q9H8H2 851 aaKnown RBP17.53■□□□□ 0.4
CASC4-209ENST00000559222 LUZP4Q9P127 313 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 C19orf25Q9UFG5 118 aaPredicted RBP17.53■□□□□ 0.4
CASC4-209ENST00000559222 MID2Q9UJV3 735 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 MMACHCQ9Y4U1 282 aa17.53■□□□□ 0.4
CASC4-209ENST00000559222 A0A1W2PR48 441 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 A0A1W2PS29 197 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 GLOD5A6NK44 160 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 TMEM233B4DJY2 109 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 FGF17O60258 216 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 AIFM1O95831 613 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 SERPINA7P05543 415 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 ENO1P06733 434 aaKnown RBP17.52■□□□□ 0.4
CASC4-209ENST00000559222 KLK1P06870 262 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 FAM58BPP0C7Q3 252 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 SLC26A5P58743 744 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 TNFRSF17Q02223 184 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 SLC13A2Q13183 592 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 FCRLBQ6BAA4 426 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 GPR180Q86V85 440 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 NUDT13Q86X67 352 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 C1orf52Q8N6N3 182 aaKnown RBP17.52■□□□□ 0.4
CASC4-209ENST00000559222 MAGEB10Q96LZ2 347 aaPredicted RBP17.52■□□□□ 0.4
CASC4-209ENST00000559222 CENPKQ9BS16 269 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 SENP1Q9P0U3 644 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 PTGFRNQ9P2B2 879 aa17.52■□□□□ 0.4
CASC4-209ENST00000559222 WDR91A4D1P6 747 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 PCDH17O14917 1159 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 MAN1A2O60476 641 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 KRT6AP02538 564 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 KRT6BP04259 564 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 BPGMP07738 259 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 SOX11P35716 441 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 TSFMP43897 325 aaKnown RBP17.51■□□□□ 0.39
CASC4-209ENST00000559222 KRT6CP48668 564 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 HSD17B7P56937 341 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 RAE1P78406 368 aaKnown RBP17.51■□□□□ 0.39
CASC4-209ENST00000559222 ACTN3Q08043 901 aaPredicted RBP17.51■□□□□ 0.39
CASC4-209ENST00000559222 PLAG1Q6DJT9 500 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 LINC00696Q6ZRV3 163 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 CUZD1Q86UP6 607 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 ZNF595Q8IYB9 648 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 NFAM1Q8NET5 270 aaPredicted RBP17.51■□□□□ 0.39
CASC4-209ENST00000559222 ADAMTS18Q8TE60 1221 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 DOK4Q8TEW6 326 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 APIPQ96GX9 242 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 VPS50Q96JG6 964 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 NPAS2Q99743 824 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 BRF2Q9HAW0 419 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 PNO1Q9NRX1 252 aaKnown RBP17.51■□□□□ 0.39
CASC4-209ENST00000559222 STK38LQ9Y2H1 464 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 FIS1Q9Y3D6 152 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 ZNF451Q9Y4E5 1061 aa17.51■□□□□ 0.39
CASC4-209ENST00000559222 SAGE2PA6NJ88 616 aa17.5■□□□□ 0.39
CASC4-209ENST00000559222 B8ZZF3 427 aa17.5■□□□□ 0.39
CASC4-209ENST00000559222 PYCARD-AS1I3L0S3 204 aa17.5■□□□□ 0.39
CASC4-209ENST00000559222 PROM1O43490 865 aa17.5■□□□□ 0.39
CASC4-209ENST00000559222 ULK1O75385 1050 aa17.5■□□□□ 0.39
CASC4-209ENST00000559222 MYO1DO94832 1006 aa17.5■□□□□ 0.39
CASC4-209ENST00000559222 F10P00742 488 aa17.5■□□□□ 0.39
CASC4-209ENST00000559222 SERPINB4P48594 390 aa17.5■□□□□ 0.39
CASC4-209ENST00000559222 ARFIP1P53367 373 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms