RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 FGF17O60258 216 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 SNNO75324 88 aaPredicted RBP10.73□□□□□ -0.69
SNX1-204ENST00000559061 ULK1O75385 1050 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 AIFM1O95831 613 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 KRT6AP02538 564 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 KRT6BP04259 564 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 SERPINE1P05121 402 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 KLK1P06870 262 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 CYC1P08574 325 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 C8orf89P0DMQ9 161 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 UROSP10746 265 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 ACPPP15309 386 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 NR1D1P20393 614 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 IL10P22301 178 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 HMOX2P30519 316 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 SOX18P35713 384 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 KRT6CP48668 564 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 RAP1GDS1P52306 607 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 PHEXP78562 749 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 IGLV3-21P80748 117 aaPredicted RBP10.73□□□□□ -0.69
SNX1-204ENST00000559061 RHDQ02161 417 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 TNFRSF17Q02223 184 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 BST1Q10588 318 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 LY6DQ14210 128 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 AP5B1Q2VPB7 878 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 SOWAHCQ53LP3 525 aaPredicted RBP10.73□□□□□ -0.69
SNX1-204ENST00000559061 XKR7Q5GH72 579 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 DGAT2L6Q6ZPD8 337 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 CLNKQ7Z7G1 428 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 NUDT13Q86X67 352 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 ZNF781Q8N8C0 355 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 SRFBP1Q8NEF9 429 aaKnown RBP10.73□□□□□ -0.69
SNX1-204ENST00000559061 NFAM1Q8NET5 270 aaPredicted RBP10.73□□□□□ -0.69
SNX1-204ENST00000559061 AGR3Q8TD06 166 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 PSMF1Q92530 271 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 NACC2Q96BF6 587 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 FAR2Q96K12 515 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 FCRL1Q96LA6 429 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 NUDT9Q9BW91 350 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 ING2Q9H160 280 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 COPS7BQ9H9Q2 264 aaPredicted RBP10.73□□□□□ -0.69
SNX1-204ENST00000559061 SIRT5Q9NXA8 310 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 VPS29Q9UBQ0 182 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 ADAM29Q9UKF5 820 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 FBXW2Q9UKT8 454 aa10.73□□□□□ -0.69
SNX1-204ENST00000559061 EXO1Q9UQ84 846 aaKnown RBP10.73□□□□□ -0.69
SNX1-204ENST00000559061 H3BQF6 201 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 PIP5K1BO14986 540 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 PGRMC2O15173 223 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 ATXN7O15265 892 aaPredicted RBP10.72□□□□□ -0.69
SNX1-204ENST00000559061 LDB3O75112 727 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 C1QL1O75973 258 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 SEC24DO94855 1032 aaPredicted RBP10.72□□□□□ -0.69
SNX1-204ENST00000559061 HPP00738 406 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 IGHEP01854 428 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 FAM58BPP0C7Q3 252 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 PRPH2P23942 346 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 SERPINB5P36952 375 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 SOX8P57073 446 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 ABCE1P61221 599 aaKnown RBP10.72□□□□□ -0.69
SNX1-204ENST00000559061 ID2Q02363 134 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 DUSP2Q05923 314 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 ZNF33BQ06732 778 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 TGM3Q08188 693 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 SFT2D3Q587I9 215 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 SH2D4BQ5SQS7 431 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 MFSD4BQ5TF39 518 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 GALNT18Q6P9A2 607 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 CPEB2Q7Z5Q1 589 aaKnown RBP10.72□□□□□ -0.69
SNX1-204ENST00000559061 GPR180Q86V85 440 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 FDCSPQ8NFU4 85 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.72□□□□□ -0.69
SNX1-204ENST00000559061 TWIST2Q8WVJ9 160 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 APOBEC4Q8WW27 367 aaKnown RBP10.72□□□□□ -0.69
SNX1-204ENST00000559061 TM4SF18Q96CE8 201 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 NPAS2Q99743 824 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 EBPLQ9BY08 206 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 ROGDIQ9GZN7 287 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 STMN4Q9H169 189 aaPredicted RBP10.72□□□□□ -0.69
SNX1-204ENST00000559061 ZBTB20Q9HC78 741 aaPredicted RBP10.72□□□□□ -0.69
SNX1-204ENST00000559061 ZNF160Q9HCG1 818 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 PRDM9Q9NQV7 894 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 HEY2Q9UBP5 337 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 ZNF223Q9UK11 482 aaPredicted RBP10.72□□□□□ -0.69
SNX1-204ENST00000559061 CES1P1Q9UKY3 287 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 FIS1Q9Y3D6 152 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 TRAF6Q9Y4K3 522 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 MMACHCQ9Y4U1 282 aa10.72□□□□□ -0.69
SNX1-204ENST00000559061 PIEZO2Q9H5I5 2752 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 A0A088AWK7 358 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 GOLGA6L10A6NI86 522 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 GLOD5A6NK44 160 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 TMEM114B3SHH9 223 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 LSM1O15116 133 aaKnown RBP10.71□□□□□ -0.69
SNX1-204ENST00000559061 MAN1A2O60476 641 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 PRMT3O60678 531 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 LINC00032P0C843 101 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 ZNF10P21506 573 aaPredicted RBP10.71□□□□□ -0.69
SNX1-204ENST00000559061 JAK1P23458 1154 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 TACR1P25103 407 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms