RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 TMED7Q9Y3B3 224 aa2.77□□□□□ -1.97
VPS13C-207ENST00000558919 NAALAD2Q9Y3Q0 740 aa2.77□□□□□ -1.97
VPS13C-207ENST00000558919 CPQQ9Y646 472 aa2.77□□□□□ -1.97
VPS13C-207ENST00000558919 POMT1Q9Y6A1 747 aa2.77□□□□□ -1.97
VPS13C-207ENST00000558919 UMODL1Q5DID0 1318 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 GTPBP10A4D1E9 387 aaKnown RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 CCSO14618 274 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 CTDSPLO15194 276 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 RAD51DO75771 328 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 LETM1O95202 739 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 VENTXO95231 258 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 DUX4L4P0CJ87 422 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 PPP2R1AP30153 589 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 CCND3P30281 292 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 MATKP42679 507 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 FHITP49789 147 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 RPS27AP62979 156 aaKnown RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 SLC3A1Q07837 685 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 PRR30Q53SZ7 412 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 MPP7Q5T2T1 576 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 RSBN1Q5VWQ0 802 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 ARMCX5Q6P1M9 558 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 ALKBH5Q6P6C2 394 aaKnown RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 DCLRE1AQ6PJP8 1040 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 CCBE1Q6UXH8 406 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 TMEM64Q6YI46 380 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 CACUL1Q86Y37 369 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 SIX6OS1Q8N1H7 587 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 ZNF781Q8N8C0 355 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 SMYD1Q8NB12 490 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 UXS1Q8NBZ7 420 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 KIAA0895Q8NCT3 520 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 KLHL30-AS1Q8NEE0 82 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 KIAA1524Q8TCG1 905 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 MRAPQ8TCY5 172 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 AFAP1L1Q8TED9 768 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 UBLCP1Q8WVY7 318 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 ZNF274Q96GC6 653 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 PARK7Q99497 189 aaKnown RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 VPS18Q9P253 973 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 ZNF319Q9P2F9 582 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 ZNF346Q9UL40 294 aaKnown RBP2.76□□□□□ -1.97
VPS13C-207ENST00000558919 SH3GLB1Q9Y371 365 aa2.76□□□□□ -1.97
VPS13C-207ENST00000558919 A0A1W2PQ72 361 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 OR5H15A6NDH6 313 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 OOEPA6NGQ2 149 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 SRRM4A7MD48 611 aaKnown RBP2.75□□□□□ -1.97
VPS13C-207ENST00000558919 ZNF724A8MTY0 619 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 ST8SIA3O43173 380 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 KBTBD11O94819 623 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 HSPA4LO95757 839 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 PDGFBP01127 241 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-207ENST00000558919 AKAP17AQ02040 695 aaKnown RBP2.75□□□□□ -1.97
VPS13C-207ENST00000558919 ARHGAP1Q07960 439 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 PCK2Q16822 640 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 FHL5Q5TD97 284 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 LIPJQ5W064 366 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 VSIG1Q86XK7 387 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 KLHL7Q8IXQ5 586 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 NHLRC2Q8NBF2 726 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 ZNRF1Q8ND25 227 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 GPR148Q8TDV2 347 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 MR1Q95460 341 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 RFT1Q96AA3 541 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 SERAC1Q96JX3 654 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 CNOT6LQ96LI5 555 aaKnown RBP2.75□□□□□ -1.97
VPS13C-207ENST00000558919 CITED2Q99967 270 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-207ENST00000558919 MLPHQ9BV36 600 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-207ENST00000558919 THUMPD3Q9BV44 507 aaKnown RBP2.75□□□□□ -1.97
VPS13C-207ENST00000558919 SLITRK2Q9H156 845 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 B4GALT7Q9UBV7 327 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 CDH7Q9ULB5 785 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 ETV7Q9Y603 341 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 KIF25-AS1Q9Y6Z4 181 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 NOTCH2Q04721 2471 aa2.75□□□□□ -1.97
VPS13C-207ENST00000558919 TEX48A0A1B0GUV7 120 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 SDR42E2A6NKP2 422 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 FOXI3A8MTJ6 420 aaPredicted RBP2.74□□□□□ -1.97
VPS13C-207ENST00000558919 TMCO5BA8MYB1 307 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 NEDD8-MDP1E9PL57 170 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 E2F3O00716 465 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 B4GAT1O43505 415 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 LYNP07948 512 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 FHP07954 510 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 SKILP12757 684 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 CCR4P51679 360 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 RBP5P82980 135 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 MFGE8Q08431 387 aaPredicted RBP2.74□□□□□ -1.97
VPS13C-207ENST00000558919 PTK6Q13882 451 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 IQCCQ4KMZ1 466 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 UTF1Q5T230 341 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 AGAP6Q5VW22 663 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 LYPLAL1Q5VWZ2 237 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 REP15Q6BDI9 236 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 CYP4V2Q6ZWL3 525 aaPredicted RBP2.74□□□□□ -1.97
VPS13C-207ENST00000558919 CD177Q8N6Q3 437 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 GANCQ8TET4 914 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 ZNF414Q96IQ9 312 aa2.74□□□□□ -1.97
VPS13C-207ENST00000558919 CDHR1Q96JP9 859 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms