RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 HCAR3P49019 387 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 NR2C2P49116 596 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 NKX2-5P52952 324 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 UGT2B15P54855 530 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 SNAP25P60880 206 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 RPL15P61313 204 aaKnown RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 ISL1P61371 349 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 DYNLT1P63172 113 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 SLC35A2P78381 396 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 TLE3Q04726 772 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 RALGDSQ12967 914 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 GRIK2Q13002 908 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 TNK1Q13470 666 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 PRKG1Q13976 671 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 FASTKQ14296 549 aaKnown RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 TWIST1Q15672 202 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 DPYSL2Q16555 572 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 BTBD16Q32M84 506 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 RFX4Q33E94 735 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 UGT3A2Q3SY77 523 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ANXA2RQ3ZCQ2 193 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 LEXMQ3ZCV2 418 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 PARP15Q460N3 678 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 TRIM60Q495X7 471 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 PYCR3Q53H96 274 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ESCO2Q56NI9 601 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 Q5BKY6 102 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ARL13AQ5H913 290 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 LDLRAP1Q5SW96 308 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ASPHD1Q5U4P2 390 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ARHGEF16Q5VV41 709 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ZNF691Q5VV52 312 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 UBE2UQ5VVX9 321 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 RSBN1Q5VWQ0 802 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 KDM4DQ6B0I6 523 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 LIN54Q6MZP7 749 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 FAM122CQ6P4D5 195 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 TMEM270Q6UE05 265 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 CCBE1Q6UXH8 406 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 SLC39A5Q6ZMH5 540 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 SCARA5Q6ZMJ2 495 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 GDPD3Q7L5L3 318 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 HDDC2Q7Z4H3 204 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 R3HCC1LQ7Z5L2 792 aaKnown RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 PTAR1Q7Z6K3 402 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 CCDC190Q86UF4 302 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 P2RY8Q86VZ1 359 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ZC3HC1Q86WB0 502 aaKnown RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 HORMAD1Q86X24 394 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 GATAD2AQ86YP4 633 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 PLCZ1Q86YW0 608 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 SNX29P2Q8IUI4 249 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 FUNDC1Q8IVP5 155 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 CNTN4Q8IWV2 1026 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 NRSN1Q8IZ57 195 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 CENPLQ8N0S6 344 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 C8orf59Q8N0T1 100 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 METTL4Q8N3J2 472 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 PAQR4Q8N4S7 273 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 TMEM199Q8N511 208 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 OR52N4Q8NGI2 321 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 OR10Z1Q8NGY1 313 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 JOSD2Q8TAC2 188 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 NDNFQ8TB73 568 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ZFAND1Q8TCF1 268 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 SPPL2BQ8TCT7 592 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 BRSK1Q8TDC3 778 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 CYGBQ8WWM9 190 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 SLC7A6Q92536 515 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 PROX1Q92786 737 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 PMM1Q92871 262 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ISG20Q96AZ6 181 aaKnown RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 PPWD1Q96BP3 646 aaKnown RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 TBC1D20Q96BZ9 403 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 TMCO6Q96DC7 493 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 PDLIM5Q96HC4 596 aaKnown RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 C1orf74Q96LT6 269 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 CEP295NLQ96MC4 621 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 SPATA13Q96N96 652 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 CCDC115Q96NT0 180 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 MUS81Q96NY9 551 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 RPRD1AQ96P16 312 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 PSKH2Q96QS6 385 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 NODALQ96S42 347 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 MBOAT4Q96T53 435 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 SDHCQ99643 169 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 KCTD14Q9BQ13 255 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 TMEM246Q9BRR3 403 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 PI4K2AQ9BTU6 479 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 TRMOQ9BU70 441 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 CRB3Q9BUF7 120 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 KIFC3Q9BVG8 833 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 TRIM2Q9C040 744 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 SLC7A5P2Q9GIP4 190 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 GABARAPL1Q9H0R8 117 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 NIPAL2Q9H841 368 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ZNF556Q9HAH1 456 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 NTN4Q9HB63 628 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 NMRAL1Q9HBL8 299 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 PRDM8Q9NQV8 689 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms