RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 GHDCQ8N2G8 530 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 PQLC1Q8N2U9 271 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 FBXW8Q8N3Y1 598 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 TRAM1L1Q8N609 369 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 NPWQ8N729 165 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 BRIX1Q8TDN6 353 aaKnown RBP6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 COX4I2Q96KJ9 171 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 RNF32Q9H0A6 362 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 KIR3DX1Q9H7L2 352 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF160Q9HCG1 818 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 XAB2Q9HCS7 855 aaKnown RBP6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 DTLQ9NZJ0 730 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 ARMCX1Q9P291 453 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 NXT1Q9UKK6 140 aaKnown RBP6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 POMPQ9Y244 141 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 TTLL3Q9Y4R7 772 aa6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 CFAP20Q9Y6A4 193 aaKnown RBP6.45□□□□□ -1.38
SPTLC2-206ENST00000557566 PHF3Q92576 2039 aaKnown RBP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 OR5H15A6NDH6 313 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 TRIM64CA6NLI5 447 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 E9PBE3 544 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 NPIPA5E9PKD4 350 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 H3BMH7 237 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 CST8O60676 142 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 WDPCPO95876 746 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 PEX11BO96011 259 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 IFNB1P01574 187 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 SERPINE1P05121 402 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 FAM58BPP0C7Q3 252 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 PRR35P0CG20 571 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 MLNP12872 115 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 ERCC2P18074 760 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 TPSB2P20231 275 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 NDUFS1P28331 727 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 MAGEA3P43357 314 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 ALDH3B2P48448 385 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 CDK9P50750 372 aaKnown RBP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 PSMD7P51665 324 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 ADARP55265 1226 aaKnown RBP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 NUP107P57740 925 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 DCDC1P59894 354 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 EIF3EP60228 445 aaKnown RBP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 PHEXP78562 749 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 ITKQ08881 620 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 DLG1Q12959 904 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 OLIG2Q13516 323 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 DPYSQ14117 519 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 KEAP1Q14145 624 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 EFTUD2Q15029 972 aaKnown RBP eCLIP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 NOMO1Q15155 1222 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 TRIP10Q15642 601 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 TPSAB1Q15661 275 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 DEFB110Q30KQ9 67 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF766Q5HY98 468 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 MARC1Q5VT66 337 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 SHEQ5VZ18 495 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 KAZNQ674X7 775 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 STEAP4Q687X5 459 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 TMEM211Q6ICI0 200 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 DCUN1D2Q6PH85 259 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 C16orf89Q6UX73 402 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 RNF111Q6ZNA4 994 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 RFX8Q6ZV50 586 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 OVCH1Q7RTY7 1134 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 SATL1Q86VE3 508 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 CDC20BQ86Y33 519 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 SIRT6Q8N6T7 355 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF655Q8N720 491 aaPredicted RBP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 LPCAT1Q8NF37 534 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 OR4E2Q8NGC2 313 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 FNDC8Q8TC99 324 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 TMEM158Q8WZ71 300 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 PSMF1Q92530 271 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF669Q96BR6 464 aaPredicted RBP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 C12orf66Q96MD2 445 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 RILPQ96NA2 401 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 TDRD1Q9BXT4 1180 aaKnown RBP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 UCK2Q9BZX2 261 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 POLR1EQ9GZS1 481 aaKnown RBP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 SPRTNQ9H040 489 aaPredicted RBP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 KLHL25Q9H0H3 589 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 SLC26A1Q9H2B4 701 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 SRMSQ9H3Y6 488 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 DHX35Q9H5Z1 703 aaKnown RBP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 PLGRKTQ9HBL7 147 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 PCDH18Q9HCL0 1135 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 RASSF1Q9NS23 344 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 ETNK2Q9NVF9 386 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 FAIMQ9NVQ4 179 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 TUBA8Q9NY65 449 aaPredicted RBP6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 DCDC2Q9UHG0 476 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 ADAMTS6Q9UKP5 1117 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 BLOC1S6Q9UL45 172 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 RNF112Q9ULX5 631 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 NPIPA1Q9UND3 350 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 CHMP2BQ9UQN3 213 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 SH3GLB1Q9Y371 365 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 COLEC10Q9Y6Z7 277 aa6.44□□□□□ -1.38
SPTLC2-206ENST00000557566 ANK3Q12955 4377 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 NSG1A0A0A6YYJ2 146 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms