RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 TEFMQ96QE5 360 aaKnown RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 OR2A14Q96R47 310 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CCNL2Q96S94 520 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CD180Q99467 661 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 FMO2Q99518 471 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 OLFM1Q99784 485 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 DPH7Q9BTV6 452 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 RAB11FIP5Q9BXF6 653 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 DPH1Q9BZG8 443 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 RAB33BQ9H082 229 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 TSPYL1Q9H0U9 437 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 GPN2Q9H9Y4 310 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 PARVBQ9HBI1 364 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 SYTL2Q9HCH5 934 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 MRPS30Q9NP92 439 aaKnown RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 ASCL3Q9NQ33 180 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 SMYD2Q9NRG4 433 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 TXLNGQ9NUQ3 528 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 ARL15Q9NXU5 204 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 GPRC5BQ9NZH0 403 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 OR6C2Q9NZP2 312 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CD274Q9NZQ7 290 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 JKAMPQ9P055 326 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 STOX2Q9P2F5 926 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CTNNAL1Q9UBT7 734 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 EPHA6Q9UF33 1036 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 TLK1Q9UKI8 766 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 POMT2Q9UKY4 750 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 PADI1Q9ULC6 663 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 V9GYY5 206 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 APC2O95996 2303 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 MN1Q10571 1320 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 IGF2RP11717 2491 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 LOC101059948A0A1B0GTJ6 334 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 TCRBV9S1A1TA0A576 114 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 SMIM23A6NLE4 172 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ARHGEF33A8MVX0 844 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 CDRT15L2A8MXV6 281 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 E7EQ34 232 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 E7ESA3 106 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 H3BUI4 141 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 CDC7O00311 574 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 PHGDHO43175 533 aaKnown RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ZNF749O43361 778 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 PSIP1O75475 530 aaKnown RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 AGFG2O95081 481 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 MATN4O95460 622 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 FSHBP01225 129 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 MT-ND3P03897 115 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 C8GP07360 202 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 INHBAP08476 426 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 FREM3P0C091 2139 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 LIPCP11150 499 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ENO3P13929 434 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 LIFP15018 202 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 STMN1P16949 149 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 MAGP20916 626 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 TYK2P29597 1187 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 PKLRP30613 574 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 HSD17B2P37059 387 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 GP5P40197 560 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ARL1P40616 181 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 PMS2P54278 862 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ADARP55265 1226 aaKnown RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 TMPRSS3P57727 454 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 RPS15P62841 145 aaKnown RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 TUBB4BP68371 445 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 MXRA7P84157 204 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ABHD18Q0P651 414 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 BMPR2Q13873 1038 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 CSHL1Q14406 222 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 EFTUD2Q15029 972 aaKnown RBP eCLIP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 SLC5A12Q1EHB4 618 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 SPDYE7PQ495Y7 208 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ZNF658BQ4V348 819 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 TAF1BQ53T94 588 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 WASHC2DQ5SRD0 308 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 LRRC8EQ6NSJ5 796 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 AGTRAPQ6RW13 159 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 MBOAT1Q6ZNC8 495 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 CDHR3Q6ZTQ4 885 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 NEK10Q6ZWH5 1172 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 USP51Q70EK9 711 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 TIPARPQ7Z3E1 657 aaKnown RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 PRSS42Q7Z5A4 293 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 MRGPREQ86SM8 312 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 TBC1D1Q86TI0 1168 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 SLC26A11Q86WA9 606 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ZC3HC1Q86WB0 502 aaKnown RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 KMT5CQ86Y97 462 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 CEP97Q8IW35 865 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 Q8N1X5 172 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 NKAPQ8N5F7 415 aaKnown RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ESX1Q8N693 406 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 METTL27Q8N6F8 245 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 SNX31Q8N9S9 440 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 LINC01555Q8NAE3 123 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 OR1L3Q8NH93 324 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 CD200R1Q8TD46 325 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms