RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 KIAA0895LQ68EN5 471 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 DCBLD1Q8N8Z6 715 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 MFSD2AQ8NA29 543 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 PPP1R13LQ8WUF5 828 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 NSMAFQ92636 917 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 RTP4Q96DX8 246 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 METTL8Q9H825 291 aaKnown RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 FAM86C1Q9NVL1 165 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF840PA6NDX5 716 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 E7EQ34 232 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 COCHO43405 550 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 JRKO75564 520 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 SNAI1O95863 264 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 JUNP05412 331 aaKnown RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF460Q14592 562 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 CCL14Q16627 93 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 TECRLQ5HYJ1 363 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 SHFQ7M4L6 423 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 JAGN1Q8N5M9 183 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 CHFRQ96EP1 664 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 BRF2Q9HAW0 419 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 BRD7Q9NPI1 651 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 CSTAP01040 98 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 UBL4AP11441 157 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 FRKP42685 505 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 SEPHS1P49903 392 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 CRISP1P54107 249 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 CLRN1P58418 232 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 OR2T4Q8NH00 348 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 OR56A3Q8NH54 315 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 DDX1Q92499 740 aaKnown RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 SEC14L1Q92503 715 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 PYCR2Q96C36 320 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 BORCS8Q96FH0 119 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF317Q96PQ6 595 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-216ENST00000556083 ARHGAP9Q9BRR9 750 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 IRS2Q9Y4H2 1338 aa10.31□□□□□ -0.76
ACTN1-216ENST00000556083 IGKV6D-21A0A0A0MT36 114 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 TEX13DA0A0J9YY54 714 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 SIX3O95343 332 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 PORP16435 677 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 MSX2P35548 267 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 YAP1P46937 504 aaKnown RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CDKL1Q00532 357 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 PRKCDQ05655 676 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CTC1Q2NKJ3 1217 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RABL3Q5HYI8 236 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 SPANXN4Q5MJ08 99 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CATSPEREQ5SY80 951 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 C1orf189Q5VU69 101 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 TMEM225Q6GV28 225 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RTL6Q6ICC9 239 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 ABHD12BQ7Z5M8 362 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CHERPQ8IWX8 916 aaKnown RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CPXM2Q8N436 756 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 FANK1Q8TC84 345 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 FBXL8Q96CD0 374 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 C16orf70Q9BSU1 422 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 NSUN3Q9H649 340 aaKnown RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 AIG1Q9NVV5 245 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 EIF3KQ9UBQ5 218 aaKnown RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 ZDHHC2Q9UIJ5 367 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RNF6Q9Y252 685 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 VSTM2BA6NLU5 285 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 FOXE1O00358 373 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 IFNA1P01562 189 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 LPLP06858 475 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CTSAP10619 480 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 SYN1P17600 705 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 GLDCP23378 1020 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 KCNJ5P48544 419 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 NRLP54845 237 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 IRF9Q00978 393 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 PCLAFQ15004 111 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 NXPE4Q6UWF7 544 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 NETO2Q8NC67 525 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 THAP4Q8WY91 577 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 SGTBQ96EQ0 304 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 XYLT2Q9H1B5 865 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RNF39Q9H2S5 420 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 UNKLQ9H9P5 680 aaKnown RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CCM2LQ9NUG4 571 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 TRNAU1APQ9NX07 287 aaKnown RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CMAHPQ9Y471 501 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 KIF13AQ9H1H9 1805 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 TRIM64A6NGJ6 449 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CD1DP15813 335 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RBMS1P29558 406 aaKnown RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 BMPR1AP36894 532 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 GPX6P59796 221 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 LASP1Q14847 261 aaKnown RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF169Q14929 603 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RHEBQ15382 184 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 AKIRIN2Q53H80 203 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 PGM2L1Q6PCE3 622 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 MAMDC2Q7Z304 686 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 ENDOVQ8N8Q3 282 aaKnown RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 GPR150Q8NGU9 434 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 TAMM41Q96BW9 452 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 LPAR4Q99677 370 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms