RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 IER2Q9BTL4 223 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 TM9SF3Q9HD45 589 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 C8orf4Q9NR00 106 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 ENAMQ9NRM1 1142 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 ACSS1Q9NUB1 689 aaPredicted RBP8.44□□□□□ -1.06
TDP1-210ENST00000554976 VNN3Q9NY84 501 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 KCMF1Q9P0J7 381 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 SH3BP4Q9P0V3 963 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 ENTPD2Q9Y5L3 495 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 AP4B1Q9Y6B7 739 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 TRBV23OR9-2A0A075B6M9 112 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 CLOCKO15516 846 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 PROM1O43490 865 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 DPM1O60762 260 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 STATHP02808 62 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 CD38P28907 300 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 GABRA4P48169 554 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 HSPA13P48723 471 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 PXNP49023 591 aaPredicted RBP8.44□□□□□ -1.06
TDP1-210ENST00000554976 KCNJ10P78508 379 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 CCDC92Q53HC0 331 aaPredicted RBP8.44□□□□□ -1.06
TDP1-210ENST00000554976 FRMPD2BQ6IN97 320 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 OGFOD3Q6PK18 319 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 TMEM26Q6ZUK4 368 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 PIWIL3Q7Z3Z3 882 aaKnown RBP8.44□□□□□ -1.06
TDP1-210ENST00000554976 TMEM179BQ7Z7N9 219 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 UBALD2Q8IYN6 164 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 ZDHHC1Q8WTX9 485 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 APOBEC4Q8WW27 367 aaKnown RBP8.44□□□□□ -1.06
TDP1-210ENST00000554976 TFAP2CQ92754 450 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 THAP11Q96EK4 314 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 ZNF681Q96N22 645 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 UGT2B28Q9BY64 529 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 GABARAPL1Q9H0R8 117 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 IL21RQ9HBE5 538 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 ACSL6Q9UKU0 697 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 OAZ3Q9UMX2 235 aa8.44□□□□□ -1.06
TDP1-210ENST00000554976 OR5K3A6NET4 321 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 PRAMEF25A6NGN4 478 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 PRKRAO75569 313 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 AIFM1O95831 613 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 MAGP20916 626 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 CERS1P27544 350 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 HOXA6P31267 233 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 KDELR2P33947 212 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 CLCN2P51788 898 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 FADDQ13158 208 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 ELOAQ14241 798 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 HEPACAMQ14CZ8 416 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 TMTC4Q5T4D3 741 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 C6orf52Q5T4I8 152 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 NDUFAF5Q5TEU4 345 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 FAM180BQ6P0A1 224 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 USP51Q70EK9 711 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 EIF3MQ7L2H7 374 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 ASPGQ86U10 573 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 DEFB123Q8N688 67 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 ZBTB8BQ8NAP8 495 aaPredicted RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 KCT2Q8NC54 265 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 VPS37AQ8NEZ2 397 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 PNPT1Q8TCS8 783 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 EME1Q96AY2 570 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 C7orf34Q96L11 122 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 SEPHS2Q99611 448 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 ANKRD60Q9BZ19 345 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 PRDM9Q9NQV7 894 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 C5AR2Q9P296 337 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 POMT2Q9UKY4 750 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 ATG4BQ9Y4P1 393 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 TDRD6O60522 2096 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 LOC105369274A0A096LPK9 316 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 LOC102723532A0A0G2JNH3 316 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 A0A0J9YY10 115 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 WASHC1A8K0Z3 465 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 EVPLLA8MZ36 301 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 C2orf74A8MZ97 194 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 TLR4O00206 839 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 PLOD2O00469 737 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 PDPK1O15530 556 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 HCRTR1O43613 425 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 MT-ND1P03886 318 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 LYNP07948 512 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 SMIM18P0DKX4 95 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 ETFAP13804 333 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 HOXB6P17509 224 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 POLR2CP19387 275 aaPredicted RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 GRK3P35626 688 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 CDK9P50750 372 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 MYBPC1Q00872 1141 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 SLC36A3Q495N2 470 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 FAM98BQ52LJ0 330 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 EXOSC6Q5RKV6 272 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 ZCCHC8Q6NZY4 707 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 SLC48A1Q6P1K1 146 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 OR4N4Q8N0Y3 316 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 CBR4Q8N4T8 237 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 OR8K5Q8NH50 307 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 FBXO30Q8TB52 745 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 MAL2Q969L2 176 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 FAM162AQ96A26 154 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms