RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 WWOXQ9NZC7 414 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 OGFRQ9NZT2 677 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 SPATA7Q9P0W8 599 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 TMCO1Q9UM00 188 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 PADI4Q9UM07 663 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 RNF215Q9Y6U7 377 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 CNOT1A5YKK6 2376 aaKnown RBP6.04□□□□□ -1.44
SCFD1-212ENST00000554486 CEP250Q9BV73 2442 aa6.04□□□□□ -1.44
SCFD1-212ENST00000554486 EME2A4GXA9 379 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-212ENST00000554486 OR6C74A6NCV1 312 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 PABPN1LA6NDY0 278 aaKnown RBP6.03□□□□□ -1.44
SCFD1-212ENST00000554486 RHPN2P1A8MT19 583 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 K7EPI3 171 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 BTN3A3O00478 584 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 E2F3O00716 465 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 CASC3O15234 703 aaKnown RBP6.03□□□□□ -1.44
SCFD1-212ENST00000554486 FLRT2O43155 660 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 NUDT21O43809 227 aaKnown RBP6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SH3BP5O60239 455 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 STK16O75716 305 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SERPINE1P05121 402 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 CHRM5P08912 532 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-212ENST00000554486 CKMT1AP12532 417 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 TYRP1P17643 537 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 TSPAN8P19075 237 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 EPORP19235 508 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 IMPDH1P20839 514 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 BGNP21810 368 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 PSMB5P28074 263 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 ARRB2P32121 409 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SHMT2P34897 504 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 HSD17B2P37059 387 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 GRK6P43250 576 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 CCR10P46092 362 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 TBPL1P62380 186 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SLC14A1Q13336 389 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 NR1D2Q14995 579 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 CHI3L2Q15782 390 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 PDK4Q16654 411 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 AASDHQ4L235 1098 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SUSD1Q6UWL2 747 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 LRRC70Q7Z2Q7 622 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 AMIGO1Q86WK6 493 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SYTL1Q8IYJ3 562 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 ADGRF3Q8IZF5 1079 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 ARFGAP2Q8N6H7 521 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 CCNYL1Q8N7R7 359 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 OR10H5Q8NGA6 315 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 FLVCR1-AS1Q8TAF5 88 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 HMGCLL1Q8TB92 370 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 ZNF483Q8TF39 744 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-212ENST00000554486 CKAP2Q8WWK9 683 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SMPDL3AQ92484 453 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 ZNF75CPQ92670 426 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-212ENST00000554486 RSC1A1Q92681 617 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 MED8Q96G25 268 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 RAB11FIP5Q9BXF6 653 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 PITPNM3Q9BZ71 974 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SRMSQ9H3Y6 488 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 GSTO2Q9H4Y5 243 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SLC32A1Q9H598 525 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 ZBTB26Q9HCK0 441 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SPHK1Q9NYA1 384 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 OR6C2Q9NZP2 312 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 LRIT1Q9P2V4 623 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 LNPEPQ9UIQ6 1025 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 PCTPQ9UKL6 214 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SLC45A2Q9UMX9 530 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SH2B3Q9UQQ2 575 aa6.03□□□□□ -1.44
SCFD1-212ENST00000554486 SPTBP11277 2137 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 KNTC1P50748 2209 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 IGHV1OR21-1A0A087WYE8 117 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 CPED1A4D0V7 1026 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 C4orf47A7E2U8 309 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 PPP6CO00743 305 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 UBFD1O14562 309 aaKnown RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 OR7A17O14581 309 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 POLR3GO15318 223 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 B4GAT1O43505 415 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 ITM2AO43736 263 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 CCNT2O60583 730 aaKnown RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 CBFA2T3O75081 653 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 SLC43A1O75387 559 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 SUPT7LO94864 414 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 WDR47O94967 919 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 LDOC1O95751 146 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 PROS1P07225 676 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 CHRNGP07510 517 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 NPPBP16860 134 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 POLR2CP19387 275 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 MDH1P40925 334 aaKnown RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 CHN2P52757 468 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 CDH13P55290 713 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 OR1D5P58170 312 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 PPP1CAP62136 330 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 RAB1AP62820 205 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 CFHR1Q03591 330 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 BST1Q10588 318 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 CDC16Q13042 620 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 STX3Q13277 289 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms