RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 LYRM4Q9HD34 91 aa8.9□□□□□ -0.98
USP15-208ENST00000548524 DMRT3Q9NQL9 472 aa8.9□□□□□ -0.98
USP15-208ENST00000548524 PRDM7Q9NQW5 492 aa8.9□□□□□ -0.98
USP15-208ENST00000548524 FBXW2Q9UKT8 454 aa8.9□□□□□ -0.98
USP15-208ENST00000548524 NTNG1Q9Y2I2 539 aa8.9□□□□□ -0.98
USP15-208ENST00000548524 TNRC6AQ8NDV7 1962 aaKnown RBP8.9□□□□□ -0.99
USP15-208ENST00000548524 PCM1Q15154 2024 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 GABRR3A8MPY1 467 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 H0YIV9 168 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 CYR61O00622 381 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 E2F3O00716 465 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 CTNSO60931 367 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 RASAL1O95294 804 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 CLDN9O95484 217 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 TNNI3P19429 210 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 TAC1P20366 129 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 CPN2P22792 545 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 PTX3P26022 381 aaPredicted RBP8.89□□□□□ -0.99
USP15-208ENST00000548524 GCAP28676 217 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 ST13P50502 369 aaKnown RBP8.89□□□□□ -0.99
USP15-208ENST00000548524 HNRNPFP52597 415 aaKnown RBP8.89□□□□□ -0.99
USP15-208ENST00000548524 STX4Q12846 297 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 SLAMF1Q13291 335 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 TUBA3CQ13748 450 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 SLC29A2Q14542 456 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 ZRSR2Q15696 482 aaKnown RBP8.89□□□□□ -0.99
USP15-208ENST00000548524 INAQ16352 499 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 ZNF766Q5HY98 468 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 TTC19Q6DKK2 380 aaPredicted RBP8.89□□□□□ -0.99
USP15-208ENST00000548524 OR4C11Q6IEV9 310 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 TUBA3EQ6PEY2 450 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 TIFABQ6ZNK6 161 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 RPS19BP1Q86WX3 136 aaKnown RBP8.89□□□□□ -0.99
USP15-208ENST00000548524 HORMAD2Q8N7B1 307 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 L3MBTL4Q8NA19 623 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 ELP5Q8TE02 316 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 FAR1Q8WVX9 515 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 MAPKAP1Q9BPZ7 522 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 SORBS1Q9BX66 1292 aaKnown RBP8.89□□□□□ -0.99
USP15-208ENST00000548524 DEFB126Q9BYW3 111 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 ADAP2Q9NPF8 381 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 OLAHQ9NV23 265 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 ANKRD10Q9NXR5 420 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 GMPR2Q9P2T1 348 aaKnown RBP8.89□□□□□ -0.99
USP15-208ENST00000548524 PSMC3IPQ9P2W1 217 aaPredicted RBP8.89□□□□□ -0.99
USP15-208ENST00000548524 RNF11Q9Y3C5 154 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 MED13Q9UHV7 2174 aa8.89□□□□□ -0.99
USP15-208ENST00000548524 SPENQ96T58 3664 aaKnown RBP8.89□□□□□ -0.99
USP15-208ENST00000548524 TRBV11-1A0A0K0K1C0 115 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 MYOCOSA0A1B0GUC4 107 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 BLACEA4D250 179 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 FCHO1O14526 889 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 OR7A17O14581 309 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 CBX6O95503 412 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 CRYABP02511 175 aaKnown RBP8.88□□□□□ -0.99
USP15-208ENST00000548524 EDN3P14138 238 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 PPP2R1BP30154 601 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 TLX1P31314 330 aaPredicted RBP8.88□□□□□ -0.99
USP15-208ENST00000548524 CD96P40200 585 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 CLCN2P51788 898 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 NEK2P51955 445 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 IFT88Q13099 833 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 SERTAD2Q14140 314 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 TERF2Q15554 542 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 OR1C1Q15619 314 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 ELAVL1Q15717 326 aaKnown RBP8.88□□□□□ -0.99
USP15-208ENST00000548524 MILR1Q7Z6M3 343 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 CNPY4Q8N129 248 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 LGI4Q8N135 537 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 TMEM132CQ8N3T6 1108 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 EIF1ADQ8N9N8 165 aaKnown RBP8.88□□□□□ -0.99
USP15-208ENST00000548524 ST6GALNAC3Q8NDV1 305 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 C7orf57Q8NEG2 295 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 NFAM1Q8NET5 270 aaPredicted RBP8.88□□□□□ -0.99
USP15-208ENST00000548524 B3GNT7Q8NFL0 401 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 OR52B6Q8NGF0 335 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 UBLCP1Q8WVY7 318 aaPredicted RBP8.88□□□□□ -0.99
USP15-208ENST00000548524 DAZLQ92904 295 aaKnown RBP8.88□□□□□ -0.99
USP15-208ENST00000548524 NCLNQ969V3 563 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 MTFMTQ96DP5 389 aaKnown RBP8.88□□□□□ -0.99
USP15-208ENST00000548524 VMP1Q96GC9 406 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 C5orf34Q96MH7 638 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 NSUN5Q96P11 429 aaKnown RBP8.88□□□□□ -0.99
USP15-208ENST00000548524 SERPINI1Q99574 410 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 BARD1Q99728 777 aaKnown RBP8.88□□□□□ -0.99
USP15-208ENST00000548524 NPAS2Q99743 824 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 ALOXE3Q9BYJ1 711 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 TXLNGYQ9BZA5 131 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 L2HGDHQ9H9P8 463 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 SEMA4BQ9NPR2 832 aaPredicted RBP8.88□□□□□ -0.99
USP15-208ENST00000548524 KLHL1Q9NR64 748 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 MS4A12Q9NXJ0 267 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 KCMF1Q9P0J7 381 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 FETUBQ9UGM5 382 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 TBK1Q9UHD2 729 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 PHF11Q9UIL8 331 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 PCTPQ9UKL6 214 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 TSC22D4Q9Y3Q8 395 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 CLCA3PQ9Y6N3 262 aa8.88□□□□□ -0.99
USP15-208ENST00000548524 GCN1Q92616 2671 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms