RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 ATP6V1E2Q96A05 226 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 PNPLA2Q96AD5 504 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 ANKRD9Q96BM1 317 aaPredicted RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 PTCHD1Q96NR3 888 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 AGAP4Q96P64 663 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 LPAR4Q99677 370 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 SORBS1Q9BX66 1292 aaKnown RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 C12orf65Q9H3J6 166 aaKnown RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 SSU72Q9NP77 194 aaKnown RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 PRTFDC1Q9NRG1 225 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 VTI1BQ9UEU0 232 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 MID2Q9UJV3 735 aa10.24□□□□□ -0.77
GCN1-202ENST00000547263 MRPS33Q9Y291 106 aaKnown RBP10.24□□□□□ -0.77
GCN1-202ENST00000547263 PSMD12O00232 456 aaPredicted RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 MANBAO00462 879 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 CLDN4O14493 209 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 PDYNP01213 254 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 MYL2P10916 166 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 CPA3P15088 417 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 CREB1P16220 341 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 DEKP35659 375 aaKnown RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 SSR2P43308 183 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 NAGLUP54802 743 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 OR4D2P58180 307 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 TNFRSF17Q02223 184 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 CSTF3Q12996 717 aaKnown RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 IFT88Q13099 833 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 SLAMF1Q13291 335 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 BIKQ13323 160 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 DDX39BQ13838 428 aaKnown RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 BEND6Q5SZJ8 279 aaPredicted RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 LIPMQ5VYY2 423 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 FAM219BQ5XKK7 198 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 RPUSD3Q6P087 351 aaKnown RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 GALNT18Q6P9A2 607 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 LRIG3Q6UXM1 1119 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 GPR180Q86V85 440 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 NUDT13Q86X67 352 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 MYLK4Q86YV6 388 aaPredicted RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 FAM47BQ8NA70 645 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 TEX19Q8NA77 164 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 CHTF18Q8WVB6 975 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 TM9SF4Q92544 642 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 PGM2Q96G03 612 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 CENPKQ9BS16 269 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 TRIM45Q9H8W5 580 aaPredicted RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 COPS7BQ9H9Q2 264 aaPredicted RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 TNFRSF12AQ9NP84 129 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 ADAP2Q9NPF8 381 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 FARSBQ9NSD9 589 aaKnown RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 LYARQ9NX58 379 aaKnown RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 PHF11Q9UIL8 331 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 ZNF223Q9UK11 482 aaPredicted RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 SNX6Q9UNH7 406 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 B3GNT3Q9Y2A9 372 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 ATG4BQ9Y4P1 393 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 PCDHGA10Q9Y5H3 936 aa10.23□□□□□ -0.77
GCN1-202ENST00000547263 SPENQ96T58 3664 aaKnown RBP10.23□□□□□ -0.77
GCN1-202ENST00000547263 A0A1W2PR48 441 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 TLDC2A0PJX2 215 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 SAP18O00422 153 aaKnown RBP10.22□□□□□ -0.77
GCN1-202ENST00000547263 DHRS4L1P0CG22 281 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 HTR6P50406 440 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 FOXA1P55317 472 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 IFFO1Q0D2I5 559 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 RAPSNQ13702 412 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 SERTAD2Q14140 314 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 ELAVL1Q15717 326 aaKnown RBP10.22□□□□□ -0.77
GCN1-202ENST00000547263 BTBD16Q32M84 506 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 PLEKHN1Q494U1 663 aaPredicted RBP10.22□□□□□ -0.77
GCN1-202ENST00000547263 TCHHL1Q5QJ38 904 aaPredicted RBP10.22□□□□□ -0.77
GCN1-202ENST00000547263 MFSD4BQ5TF39 518 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 B3GNTL1Q67FW5 361 aaPredicted RBP10.22□□□□□ -0.77
GCN1-202ENST00000547263 TRIM46Q7Z4K8 759 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 CUZD1Q86UP6 607 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 EXOC3L1Q86VI1 746 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 SRRM1Q8IYB3 904 aaKnown RBP10.22□□□□□ -0.77
GCN1-202ENST00000547263 CDYL2Q8N8U2 506 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 GBP7Q8N8V2 638 aaPredicted RBP10.22□□□□□ -0.77
GCN1-202ENST00000547263 ARMC2Q8NEN0 867 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 B3GNT7Q8NFL0 401 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 DNAJB14Q8TBM8 379 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 TCP10LQ8TDR4 215 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 SELENOMQ8WWX9 145 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 TANKQ92844 425 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 MIB2Q96AX9 1013 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 ZIM3Q96PE6 472 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 TRMOQ9BU70 441 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 GATA5Q9BWX5 397 aaPredicted RBP10.22□□□□□ -0.77
GCN1-202ENST00000547263 MRPL1Q9BYD6 325 aaKnown RBP10.22□□□□□ -0.77
GCN1-202ENST00000547263 ACPTQ9BZG2 426 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 ELOVL6Q9H5J4 265 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 SLC17A7Q9P2U7 560 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 CCL27Q9Y4X3 112 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 PCDHGB6Q9Y5F9 930 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 CSAG2Q9Y5P2 127 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 ACTL7BQ9Y614 415 aa10.22□□□□□ -0.77
GCN1-202ENST00000547263 FASNP49327 2511 aaKnown RBP10.22□□□□□ -0.77
GCN1-202ENST00000547263 TMEM200CA6NKL6 621 aa10.21□□□□□ -0.77
GCN1-202ENST00000547263 SLC28A2O43868 658 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms