RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 PSORS1C1Q9UIG5 152 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 ISM1B1AKI9 464 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 WDR5P61964 334 aaKnown RBP14.02□□□□□ -0.17
HOXC11-202ENST00000546378 IFI44LQ53G44 452 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF438Q7Z4V0 828 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 C7orf61Q8IZ16 206 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 UXS1Q8NBZ7 420 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 IL17RDQ8NFM7 739 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 SUN5Q8TC36 379 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 HMGB4Q8WW32 186 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 COL26A1Q96A83 441 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 ITPKCQ96DU7 683 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 CLSTN3Q9BQT9 956 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 C11orf54Q9H0W9 315 aaPredicted RBP14.02□□□□□ -0.17
HOXC11-202ENST00000546378 TMEM189-UBE2V1I3L0A0 370 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 KPNA3O00505 521 aaPredicted RBP14.02□□□□□ -0.17
HOXC11-202ENST00000546378 MYL9P24844 172 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 CDK6Q00534 326 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 GRIK2Q13002 908 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 SNAPC1Q16533 368 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 CAPN13Q6MZZ7 669 aaPredicted RBP14.02□□□□□ -0.17
HOXC11-202ENST00000546378 CEACAM20Q6UY09 585 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 FAM124AQ86V42 546 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 NPAS3Q8IXF0 933 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 SMG7Q92540 1137 aaKnown RBP14.02□□□□□ -0.17
HOXC11-202ENST00000546378 PPCDCQ96CD2 204 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 TRMT61BQ9BVS5 477 aaKnown RBP14.02□□□□□ -0.17
HOXC11-202ENST00000546378 NMNAT1Q9HAN9 279 aaPredicted RBP14.02□□□□□ -0.17
HOXC11-202ENST00000546378 CPNE5Q9HCH3 593 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 SEMA3GQ9NS98 782 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF624Q9P2J8 865 aaPredicted RBP14.02□□□□□ -0.17
HOXC11-202ENST00000546378 B4GALT6Q9UBX8 382 aa14.02□□□□□ -0.17
HOXC11-202ENST00000546378 TDRD15B5MCY1 1934 aaKnown RBP14.01□□□□□ -0.17
HOXC11-202ENST00000546378 NEDD8-MDP1E9PL57 170 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 SLITRK5O94991 958 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 CXCL10P02778 98 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 CHRNB1P11230 501 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 CYP2A7P20853 494 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 PRPS1L1P21108 318 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 CHMP24386 653 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 HTR3AP46098 478 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 Q5BKY6 102 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF697Q5TEC3 545 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 NCEH1Q6PIU2 408 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 AMIGO1Q86WK6 493 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 OR8H3Q8N146 312 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 OR5H6Q8NGV6 325 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 GRPEL2Q8TAA5 225 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 DNAJA3Q96EY1 480 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 WFDC6Q9BQY6 131 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 DOHHQ9BU89 302 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 CERS4Q9HA82 394 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 SPG21Q9NZD8 308 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 PCDHB1Q9Y5F3 818 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF840PA6NDX5 716 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 CPSF4LA6NMK7 179 aaKnown RBP14.01□□□□□ -0.17
HOXC11-202ENST00000546378 DRGXA6NNA5 263 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 CD160O95971 181 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 TIMP1P01033 207 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 NPPAP01160 153 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 AOAHP28039 575 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 MAPK1P28482 360 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 CTSCP53634 463 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 KCNJ10P78508 379 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 CSTF1Q05048 431 aaKnown RBP14.01□□□□□ -0.17
HOXC11-202ENST00000546378 EIF4EBP2Q13542 120 aaPredicted RBP14.01□□□□□ -0.17
HOXC11-202ENST00000546378 QPRTQ15274 297 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF181Q2M3W8 571 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 PNCKQ6P2M8 343 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 CRTC1Q6UUV9 634 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 DPY19L3Q6ZPD9 716 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF717Q9BY31 904 aaPredicted RBP14.01□□□□□ -0.17
HOXC11-202ENST00000546378 POLR2J3Q9H1A7 115 aaKnown RBP14.01□□□□□ -0.17
HOXC11-202ENST00000546378 P2RY12Q9H244 342 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 CWH43Q9H720 699 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 TRIM45Q9H8W5 580 aaPredicted RBP14.01□□□□□ -0.17
HOXC11-202ENST00000546378 KCTD5Q9NXV2 234 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 SSR3Q9UNL2 185 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 SCN3AQ9NY46 2000 aa14.01□□□□□ -0.17
HOXC11-202ENST00000546378 FEZF1A0PJY2 475 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 FAM183AA6NL82 134 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 H3BQ06 376 aaPredicted RBP14□□□□□ -0.17
HOXC11-202ENST00000546378 TLR4O00206 839 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 ARHGEF9O43307 516 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 GGT2P36268 569 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 MRPL28Q13084 256 aaKnown RBP14□□□□□ -0.17
HOXC11-202ENST00000546378 SLBPQ14493 270 aaKnown RBP eCLIP14□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF791Q3KP31 576 aaPredicted RBP14□□□□□ -0.17
HOXC11-202ENST00000546378 SLC35F1Q5T1Q4 408 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 ARTNQ5T4W7 220 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 RETSATQ6NUM9 610 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 AGTRAPQ6RW13 159 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 LRRTM4Q86VH4 590 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 GALNT13Q8IUC8 556 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 YIPF7Q8N8F6 280 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 UCN3Q969E3 161 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 NEIL2Q969S2 332 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 RIOK2Q9BVS4 552 aaKnown RBP14□□□□□ -0.17
HOXC11-202ENST00000546378 CHIAQ9BZP6 476 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 CRISPLD2Q9H0B8 497 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms