RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	MYO1D	O94832	1006 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	CLDN9	O95484	217 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	F10	P00742	488 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	LDLR	P01130	860 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	RPS17	P08708	135 aa	Known RBP	12.51	□□□□□ -0.41
POLE-222	ENST00000545015	STS	P08842	583 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	SBK3	P0C264	359 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	PCNA	P12004	261 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	TPP2	P29144	1249 aa	Predicted RBP	12.51	□□□□□ -0.41
POLE-222	ENST00000545015	PHEX	P78562	749 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	SLC13A2	Q13183	592 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	BIK	Q13323	160 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	OR1C1	Q15619	314 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	GGTA1P	Q4G0N0	100 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	MRM1	Q6IN84	353 aa	Known RBP	12.51	□□□□□ -0.41
POLE-222	ENST00000545015	TMEM132C	Q8N3T6	1108 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	DAZL	Q92904	295 aa	Known RBP	12.51	□□□□□ -0.41
POLE-222	ENST00000545015	RGMA	Q96B86	450 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	VMP1	Q96GC9	406 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	MAPKAP1	Q9BPZ7	522 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	CENPK	Q9BS16	269 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	ZNF717	Q9BY31	904 aa	Predicted RBP	12.51	□□□□□ -0.41
POLE-222	ENST00000545015	EPB41L4B	Q9H329	900 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	OR51B5	Q9H339	312 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	ZBTB26	Q9HCK0	441 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	ERRFI1	Q9UJM3	462 aa	Predicted RBP	12.51	□□□□□ -0.41
POLE-222	ENST00000545015	ZNF223	Q9UK11	482 aa	Predicted RBP	12.51	□□□□□ -0.41
POLE-222	ENST00000545015	PCTP	Q9UKL6	214 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	SPACA6	W5XKT8	324 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	DOPEY1	Q5JWR5	2465 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	SPTAN1	Q13813	2472 aa	Known RBP	12.5	□□□□□ -0.41
POLE-222	ENST00000545015	RTCA	O00442	366 aa	Known RBP	12.5	□□□□□ -0.41
POLE-222	ENST00000545015	SMIM24	O75264	130 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	SEMA3D	O95025	777 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	CD46	P15529	392 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	EEF1D	P29692	281 aa	Known RBP	12.5	□□□□□ -0.41
POLE-222	ENST00000545015	PPP2R1B	P30154	601 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	SSR2	P43308	183 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	TRAF3	Q13114	568 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	C4orf17	Q53FE4	359 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	SLC25A25	Q6KCM7	469 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	ZNF227	Q86WZ6	799 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	TMEM178A	Q8NBL3	297 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	MORN4	Q8NDC4	146 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	MYRIP	Q8NFW9	859 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	OR8K3	Q8NH51	312 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	OR14A16	Q8NHC5	309 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	UHMK1	Q8TAS1	419 aa	Known RBP	12.5	□□□□□ -0.41
POLE-222	ENST00000545015	ACMSD	Q8TDX5	336 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	PTPMT1	Q8WUK0	201 aa	Predicted RBP	12.5	□□□□□ -0.41
POLE-222	ENST00000545015	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.5	□□□□□ -0.41
POLE-222	ENST00000545015	MAGEB10	Q96LZ2	347 aa	Predicted RBP	12.5	□□□□□ -0.41
POLE-222	ENST00000545015	MTERF1	Q99551	399 aa	Known RBP	12.5	□□□□□ -0.41
POLE-222	ENST00000545015	ALOXE3	Q9BYJ1	711 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	DEFB126	Q9BYW3	111 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	NOL11	Q9H8H0	719 aa	Known RBP	12.5	□□□□□ -0.41
POLE-222	ENST00000545015	DDX31	Q9H8H2	851 aa	Known RBP	12.5	□□□□□ -0.41
POLE-222	ENST00000545015	LRFN1	Q9P244	771 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	PHF11	Q9UIL8	331 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015	RNF11	Q9Y3C5	154 aa		12.5	□□□□□ -0.41
POLE-222	ENST00000545015		A0A0A6YYD5	115 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015		A8MUA0	341 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	FCHO1	O14526	889 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	ZFAND5	O76080	213 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	SP1	P08047	785 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	FAM153B	P0C7A2	387 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	RHOXF2B	P0C7M4	288 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	RNF224	P0DH78	156 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	CPN2	P22792	545 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	BSG	P35613	385 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	CYB561	P49447	251 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	HLCS	P50747	726 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	RPS13	P62277	151 aa	Known RBP	12.49	□□□□□ -0.41
POLE-222	ENST00000545015	SLAMF1	Q13291	335 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	SLC29A2	Q14542	456 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	ZRSR2	Q15696	482 aa	Known RBP	12.49	□□□□□ -0.41
POLE-222	ENST00000545015	CPSF6	Q16630	551 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
POLE-222	ENST00000545015	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	12.49	□□□□□ -0.41
POLE-222	ENST00000545015	FAM153C	Q494X1	144 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.49	□□□□□ -0.41
POLE-222	ENST00000545015	SPINK14	Q6IE38	97 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	GPR180	Q86V85	440 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	RNF175	Q8N4F7	328 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	OR52B6	Q8NGF0	335 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	ZNF483	Q8TF39	744 aa	Predicted RBP	12.49	□□□□□ -0.41
POLE-222	ENST00000545015	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
POLE-222	ENST00000545015	TANK	Q92844	425 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	NCLN	Q969V3	563 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	PHF21B	Q96EK2	531 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	SCYL1	Q96KG9	808 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	C5orf34	Q96MH7	638 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	SERPINI1	Q99574	410 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	RHOXF2	Q9BQY4	288 aa		12.49	□□□□□ -0.41
POLE-222	ENST00000545015	PNO1	Q9NRX1	252 aa	Known RBP	12.49	□□□□□ -0.41
POLE-222	ENST00000545015	RYDEN	Q9NUL5	291 aa	Known RBP	12.49	□□□□□ -0.41
POLE-222	ENST00000545015	LYAR	Q9NX58	379 aa	Known RBP	12.49	□□□□□ -0.41
POLE-222	ENST00000545015	TRBV11-1	A0A0K0K1C0	115 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	IQANK1	A0A1B0GTG1	560 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015	TMEM200C	A6NKL6	621 aa		12.48	□□□□□ -0.41
POLE-222	ENST00000545015		A8MT66	165 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms