RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 PDPK1O15530 556 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 ZCCHC18P0CG32 403 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 GRK6P43250 576 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 KCNAB1Q14722 419 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 INAVAQ3KP66 663 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 C18orf63Q68DL7 685 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 PDSS2Q86YH6 399 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 OR4A15Q8NGL6 344 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 EXOSC8Q96B26 276 aaKnown RBP28.8■■■□□ 2.2
CCM2-219ENST00000544363 CPPED1Q9BRF8 314 aaPredicted RBP28.8■■■□□ 2.2
CCM2-219ENST00000544363 THUMPD3Q9BV44 507 aaKnown RBP28.8■■■□□ 2.2
CCM2-219ENST00000544363 ALG2Q9H553 416 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 LYRM4Q9HD34 91 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 DAPP1Q9UN19 280 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 AP3M1Q9Y2T2 418 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 NAALAD2Q9Y3Q0 740 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 A8MU76 341 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 NVLO15381 856 aaKnown RBP28.8■■■□□ 2.2
CCM2-219ENST00000544363 PRKRAO75569 313 aaKnown RBP28.8■■■□□ 2.2
CCM2-219ENST00000544363 C6orf47O95873 294 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 GSK3BP49841 420 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 LIM2P55344 173 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 NDUFA9Q16795 377 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 ZNF574Q6ZN55 896 aaPredicted RBP28.8■■■□□ 2.2
CCM2-219ENST00000544363 TMPRSS9Q7Z410 1059 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 AURKBQ96GD4 344 aaPredicted RBP28.8■■■□□ 2.2
CCM2-219ENST00000544363 ZNF768Q9H5H4 540 aaKnown RBP28.8■■■□□ 2.2
CCM2-219ENST00000544363 IKZF5Q9H5V7 419 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 ANKHQ9HCJ1 492 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 UTS2RQ9UKP6 389 aa28.8■■■□□ 2.2
CCM2-219ENST00000544363 DMDP11532 3685 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 ACOT8O14734 319 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 PGRMC2O15173 223 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 DNAJA2O60884 412 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 NELFEP18615 380 aaKnown RBP28.79■■■□□ 2.2
CCM2-219ENST00000544363 FRKP42685 505 aaPredicted RBP28.79■■■□□ 2.2
CCM2-219ENST00000544363 PCBP4P57723 403 aaKnown RBP28.79■■■□□ 2.2
CCM2-219ENST00000544363 HBA1P69905 142 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 GARNL3Q5VVW2 1013 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 DPYSL5Q9BPU6 564 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 ECSITQ9BQ95 431 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 IRAK4Q9NWZ3 460 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 MS4A12Q9NXJ0 267 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 PDP2Q9P2J9 529 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 VPS4AQ9UN37 437 aa28.79■■■□□ 2.2
CCM2-219ENST00000544363 ZNF860A6NHJ4 632 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 GLOD5A6NK44 160 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 DNAJB6O75190 326 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 ZNF806P0C7X5 589 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 NR2F6P10588 404 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 CPN2P22792 545 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 BUD31P41223 144 aaPredicted RBP28.78■■■□□ 2.2
CCM2-219ENST00000544363 TNFRSF17Q02223 184 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 TRAP1Q12931 704 aaKnown RBP28.78■■■□□ 2.2
CCM2-219ENST00000544363 FLOT2Q14254 428 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 TMTC4Q5T4D3 741 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 FAM180BQ6P0A1 224 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 SLC48A1Q6P1K1 146 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 SUMF1Q8NBK3 374 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 OR4D9Q8NGE8 314 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 C10orf90Q96M02 699 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 KCTD14Q9BQ13 255 aaPredicted RBP28.78■■■□□ 2.2
CCM2-219ENST00000544363 NPLQ9BXD5 320 aaPredicted RBP28.78■■■□□ 2.2
CCM2-219ENST00000544363 PCDHAC1Q9H158 963 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 SLC35C2Q9NQQ7 365 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 ENAMQ9NRM1 1142 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 ZNF282Q9UDV7 671 aaPredicted RBP28.78■■■□□ 2.2
CCM2-219ENST00000544363 CES1P1Q9UKY3 287 aa28.78■■■□□ 2.2
CCM2-219ENST00000544363 FITM1A5D6W6 292 aa28.77■■■□□ 2.2
CCM2-219ENST00000544363 BCAS2O75934 225 aaPredicted RBP28.77■■■□□ 2.2
CCM2-219ENST00000544363 ABCB1P08183 1280 aaPredicted RBP28.77■■■□□ 2.2
CCM2-219ENST00000544363 BNIP2Q12982 314 aa28.77■■■□□ 2.2
CCM2-219ENST00000544363 PRR23CQ6ZRP0 262 aa28.77■■■□□ 2.2
CCM2-219ENST00000544363 OR5P2Q8WZ92 322 aa28.77■■■□□ 2.2
CCM2-219ENST00000544363 SPRTNQ9H040 489 aaPredicted RBP28.77■■■□□ 2.2
CCM2-219ENST00000544363 SLAMF7Q9NQ25 335 aa28.77■■■□□ 2.2
CCM2-219ENST00000544363 TAS2R9Q9NYW1 312 aa28.77■■■□□ 2.2
CCM2-219ENST00000544363 HYKKA2RU49 373 aa28.76■■■□□ 2.2
CCM2-219ENST00000544363 WASHC1A8K0Z3 465 aa28.76■■■□□ 2.2
CCM2-219ENST00000544363 ATP6V1G2O95670 118 aa28.76■■■□□ 2.2
CCM2-219ENST00000544363 MSL3P1P0C860 447 aa28.76■■■□□ 2.2
CCM2-219ENST00000544363 OLR1P78380 273 aa28.76■■■□□ 2.2
CCM2-219ENST00000544363 COL9A2Q14055 689 aaPredicted RBP28.76■■■□□ 2.2
CCM2-219ENST00000544363 CCNIQ14094 377 aa28.76■■■□□ 2.2
CCM2-219ENST00000544363 FAM53BQ14153 422 aa28.76■■■□□ 2.2
CCM2-219ENST00000544363 IFNEQ86WN2 208 aa28.76■■■□□ 2.2
CCM2-219ENST00000544363 ZBED6CLQ96FA7 236 aaPredicted RBP28.76■■■□□ 2.2
CCM2-219ENST00000544363 COL25A1Q9BXS0 654 aaPredicted RBP28.76■■■□□ 2.2
CCM2-219ENST00000544363 ACSS1Q9NUB1 689 aaPredicted RBP28.76■■■□□ 2.2
CCM2-219ENST00000544363 BCAP29Q9UHQ4 241 aa28.76■■■□□ 2.2
CCM2-219ENST00000544363 NUP214P35658 2090 aaPredicted RBP28.76■■■□□ 2.2
CCM2-219ENST00000544363 SGK494L7N484 410 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 CLIC1O00299 241 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 FLRT2O43155 660 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 MED26O95402 600 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 ANKRD34CP0C6C1 535 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 TLX1P31314 330 aaPredicted RBP28.76■■■□□ 2.19
CCM2-219ENST00000544363 EMP3P54852 163 aa28.76■■■□□ 2.19
CCM2-219ENST00000544363 MANFP55145 182 aaKnown RBP28.76■■■□□ 2.19
CCM2-219ENST00000544363 SKP1P63208 163 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms