RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 PNO1Q9NRX1 252 aaKnown RBP9.62□□□□□ -0.87
NPIPB4-217ENST00000543449 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.62□□□□□ -0.87
NPIPB4-217ENST00000543449 VTI1BQ9UEU0 232 aa9.62□□□□□ -0.87
NPIPB4-217ENST00000543449 ADAM29Q9UKF5 820 aa9.62□□□□□ -0.87
NPIPB4-217ENST00000543449 SNX6Q9UNH7 406 aa9.62□□□□□ -0.87
NPIPB4-217ENST00000543449 SLC5A6Q9Y289 635 aa9.62□□□□□ -0.87
NPIPB4-217ENST00000543449 ASB1Q9Y576 335 aa9.62□□□□□ -0.87
NPIPB4-217ENST00000543449 CSAG2Q9Y5P2 127 aa9.62□□□□□ -0.87
NPIPB4-217ENST00000543449 DOCK10Q96BY6 2186 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 A0A1B0GUH1 482 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 OR2W5A6NFC9 320 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 C4orf51C9J302 202 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 FAM227AF5H4B4 570 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 H3BQF6 201 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 DNAJB6O75190 326 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 MYO1DO94832 1006 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 TBX6O95947 436 aaPredicted RBP9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 TNNI3P19429 210 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 TNFRSF8P28908 595 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 CASP6P55212 293 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 MLF1P58340 268 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 OR1C1Q15619 314 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 ZRSR2Q15696 482 aaKnown RBP9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 KRTCAP3Q53RY4 240 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 FRG2Q64ET8 278 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 CYP20A1Q6UW02 462 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 MILR1Q7Z6M3 343 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 GPR180Q86V85 440 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 NUDT13Q86X67 352 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 PLD6Q8N2A8 252 aaKnown RBP9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 POGLUT1Q8NBL1 392 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 MDS2Q8NDY4 140 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 NFAM1Q8NET5 270 aaPredicted RBP9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 UHMK1Q8TAS1 419 aaKnown RBP9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 PHF21BQ96EK2 531 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 RBM18Q96H35 190 aaKnown RBP9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 FRG2BQ96QU4 278 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 ALOXE3Q9BYJ1 711 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 ELOVL6Q9H5J4 265 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 RPF2Q9H7B2 306 aaKnown RBP9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 NOL11Q9H8H0 719 aaKnown RBP9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 DDX31Q9H8H2 851 aaKnown RBP9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 KCMF1Q9P0J7 381 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 LRFN1Q9P244 771 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 COPS7AQ9UBW8 275 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 DCDC2Q9UHG0 476 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 PCTPQ9UKL6 214 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 KLF13Q9Y2Y9 288 aaPredicted RBP9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 YARS2Q9Y2Z4 477 aaKnown RBP9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 SCN3AQ9NY46 2000 aa9.61□□□□□ -0.87
NPIPB4-217ENST00000543449 TRBV11-1A0A0K0K1C0 115 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 ARHGAP10A1A4S6 786 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 KLRC4-KLRK1H3BQV0 150 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 SIX3O95343 332 aaPredicted RBP9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 SP1P08047 785 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 RPS17P08708 135 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 ATP5F1P24539 256 aaPredicted RBP9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 GALNSP34059 522 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 GMPRP36959 345 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 CD96P40200 585 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 HLCSP50747 726 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 RPS13P62277 151 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 HERVK_113P63132 956 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 PLIN5Q00G26 463 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 TNFRSF17Q02223 184 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 SRSF11Q05519 484 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 TBL3Q12788 808 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 SLAMF1Q13291 335 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 MRPL49Q13405 166 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 SLC29A2Q14542 456 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 RASA2Q15283 850 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 EIF2S3LQ2VIR3 472 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 C4orf17Q53FE4 359 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 ZNF324BQ6AW86 544 aaPredicted RBP9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 SLC25A25Q6KCM7 469 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 MTFR2Q6P444 385 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 HSDL2Q6YN16 418 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 ZNF793Q6ZN11 406 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 UBE3DQ7Z6J8 389 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 TMEM156Q8N614 296 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 APCDD1LQ8NCL9 501 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 WDR20Q8TBZ3 569 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 NCLNQ969V3 563 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 SCMH1Q96GD3 660 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 DGAT2Q96PD7 388 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 MTERF1Q99551 399 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 ERVK-6Q9BXR3 956 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 TXLNGYQ9BZA5 131 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 OR51B5Q9H339 312 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 BRF2Q9HAW0 419 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 TRPS1Q9UHF7 1281 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 MID2Q9UJV3 735 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 FBXW2Q9UKT8 454 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 NTNG1Q9Y2I2 539 aa9.6□□□□□ -0.87
NPIPB4-217ENST00000543449 GCN1Q92616 2671 aaKnown RBP9.59□□□□□ -0.87
NPIPB4-217ENST00000543449 ASPDHA6ND91 283 aa9.59□□□□□ -0.87
NPIPB4-217ENST00000543449 A8MT66 165 aa9.59□□□□□ -0.87
NPIPB4-217ENST00000543449 A8MUA0 341 aa9.59□□□□□ -0.87
NPIPB4-217ENST00000543449 PLPP1O14494 284 aa9.59□□□□□ -0.87
NPIPB4-217ENST00000543449 GLRA3O75311 464 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms