RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 DNAJC22Q8N4W6 341 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 APOBEC4Q8WW27 367 aaKnown RBP6.24□□□□□ -1.41
PTPRO-208ENST00000542557 SUSD6Q92537 303 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 ABTB1Q969K4 478 aaPredicted RBP6.24□□□□□ -1.41
PTPRO-208ENST00000542557 KCNC2Q96PR1 638 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 COPS4Q9BT78 406 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 CXorf36Q9H7Y0 433 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 ADAM29Q9UKF5 820 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 HCN4Q9Y3Q4 1203 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 ZNF451Q9Y4E5 1061 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 MAP4K5Q9Y4K4 846 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 PCYT1BQ9Y5K3 369 aaPredicted RBP6.24□□□□□ -1.41
PTPRO-208ENST00000542557 DGKBQ9Y6T7 804 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 MKI67P46013 3256 aaKnown RBP6.24□□□□□ -1.41
PTPRO-208ENST00000542557 PRAMEF33A0A0G2JMD5 474 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 OTOL1A6NHN0 477 aaPredicted RBP6.24□□□□□ -1.41
PTPRO-208ENST00000542557 ANKDD1BA6NHY2 528 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 CLCA1A8K7I4 914 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 M0R3G1 203 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 PRAMEF10O60809 474 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 PDE9AO76083 593 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 IFNW1P05000 195 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 CDK1P06493 297 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 TNFRSF1BP20333 461 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 NR4A1P22736 598 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 IDUAP35475 653 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 BSGP35613 385 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 CCR8P51685 355 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 MAPK12P53778 367 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 DMPKQ09013 629 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 HEPACAMQ14CZ8 416 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 RGS21Q2M5E4 152 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 IER5LQ5T953 404 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 FAM46CQ5VWP2 391 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 REEP3Q6NUK4 255 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 FBXO46Q6PJ61 603 aaPredicted RBP6.24□□□□□ -1.41
PTPRO-208ENST00000542557 FAM92BQ6ZTR7 304 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 IGFN1Q86VF2 1251 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 MMAAQ8IVH4 418 aaKnown RBP6.24□□□□□ -1.41
PTPRO-208ENST00000542557 ADGRF3Q8IZF5 1079 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 ANKRD53Q8N9V6 530 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 LMNTD1Q8N9Z9 388 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 PLA2G15Q8NCC3 412 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 OR5AK3PQ8NH89 298 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 PSMA8Q8TAA3 256 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 NDNFQ8TB73 568 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 SMPDL3AQ92484 453 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 BADQ92934 168 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 SLC38A4Q969I6 547 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 TM4SF18Q96CE8 201 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 ZFYVE19Q96K21 471 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 MAPKAP1Q9BPZ7 522 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 ZNF556Q9HAH1 456 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 ACER3Q9NUN7 267 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 THAP10Q9P2Z0 257 aaPredicted RBP6.24□□□□□ -1.41
PTPRO-208ENST00000542557 TAC3Q9UHF0 121 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 PLAGL1Q9UM63 463 aa6.24□□□□□ -1.41
PTPRO-208ENST00000542557 FAM32AQ9Y421 112 aaKnown RBP6.24□□□□□ -1.41
PTPRO-208ENST00000542557 LAMA2P24043 3122 aaKnown RBP6.24□□□□□ -1.41
PTPRO-208ENST00000542557 TRBC2A0A5B9 178 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 J3QRK9 145 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 PDPK1O15530 556 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 MAN1A2O60476 641 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 CCNB2O95067 398 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 CD36P16671 472 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 UGT2B10P36537 528 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TSPAN7P41732 249 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 IL12RB1P42701 662 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 OR1E2P47887 323 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 PCBP4P57723 403 aaKnown RBP6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TRA2BP62995 288 aaKnown RBP6.23□□□□□ -1.41
PTPRO-208ENST00000542557 CNTN1Q12860 1018 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 DGCR6Q14129 220 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 MLC1Q15049 377 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 UBE2Q1Q7Z7E8 422 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 NUDT13Q86X67 352 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 CCDC103Q8IW40 242 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 CENPSQ8N2Z9 138 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 UBE2FQ969M7 185 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 NIPSNAP1Q9BPW8 284 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 SORBS1Q9BX66 1292 aaKnown RBP6.23□□□□□ -1.41
PTPRO-208ENST00000542557 BTBD2Q9BX70 525 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TRPV4Q9HBA0 871 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 SLAMF7Q9NQ25 335 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 PRSS16Q9NQE7 514 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 RLIMQ9NVW2 624 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 RHBDL2Q9NX52 303 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 ZNF226Q9NYT6 803 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 SLC23A2Q9UGH3 650 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TDRKHQ9Y2W6 561 aaKnown RBP6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TMEM98Q9Y2Y6 226 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 ALPK3Q96L96 1907 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 PDE4DIPQ5VU43 2346 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 A0A1W2PPV9 198 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 SH3D21A4FU49 640 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 KMOO15229 486 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 MPZL2O60487 215 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 ICMTO60725 284 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 GADD45GO95257 159 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 ADAP00813 363 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms