RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 KCMF1Q9P0J7 381 aa9.06□□□□□ -0.96
CHFR-220ENST00000541817 BAIAP2L1Q9UHR4 511 aa9.06□□□□□ -0.96
CHFR-220ENST00000541817 SLC39A10Q9ULF5 831 aa9.06□□□□□ -0.96
CHFR-220ENST00000541817 IGLV3-16A0A075B6K0 115 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 ATP6AP2A0A1C7CYW4 349 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 FEZF1A0PJY2 475 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 WDR91A4D1P6 747 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 HSPB2A8KAH6 182 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 A8MUA0 341 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 TRIM49D1C9J1S8 452 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 EEF1E1-BLOC1S5C9J1V9 151 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 GOLGA8RI6L899 631 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 PPP1R12AO14974 1030 aaPredicted RBP9.05□□□□□ -0.96
CHFR-220ENST00000541817 EEF1E1O43324 174 aaKnown RBP9.05□□□□□ -0.96
CHFR-220ENST00000541817 HNRNPCL1O60812 293 aaKnown RBP9.05□□□□□ -0.96
CHFR-220ENST00000541817 WDR1O75083 606 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 ATP6AP2O75787 350 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 ATP6V1G2O95670 118 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 TP53P04637 393 aaPredicted RBP9.05□□□□□ -0.96
CHFR-220ENST00000541817 APRTP07741 180 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 MLNP12872 115 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 EZRP15311 586 aaKnown RBP9.05□□□□□ -0.96
CHFR-220ENST00000541817 ADRA1DP25100 572 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 ACRV1P26436 265 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 CNTFP26441 200 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 OR4D2P58180 307 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 ABRAXAS2Q15018 415 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 PDK1Q15118 436 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 TAF1AQ15573 450 aaPredicted RBP9.05□□□□□ -0.96
CHFR-220ENST00000541817 SLC14A2Q15849 920 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 HSPB2Q16082 182 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 ACKR1Q16570 336 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 SPDYAQ5MJ70 313 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 TRILQ7L0X0 811 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 OTOAQ7RTW8 1153 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 KIF18BQ86Y91 864 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 PIANPQ8IYJ0 282 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 AGGF1Q8N302 714 aaeCLIP9.05□□□□□ -0.96
CHFR-220ENST00000541817 ARHGEF39Q8N4T4 335 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 FITM2Q8N6M3 262 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 OR2M7Q8NG81 312 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 OR2A1Q8NGT9 310 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 GSDMBQ8TAX9 411 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 MVB12AQ96EY5 273 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 TEKT5Q96M29 485 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 CCDC138Q96M89 665 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 LPAR4Q99677 370 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 EBNA1BP2Q99848 306 aaKnown RBP9.05□□□□□ -0.96
CHFR-220ENST00000541817 MACROD1Q9BQ69 325 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 PIGQQ9BRB3 760 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 WDR83Q9BRX9 315 aaKnown RBP9.05□□□□□ -0.96
CHFR-220ENST00000541817 TSSK1BQ9BXA7 367 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 TTTY12Q9BZ98 90 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 MYLK2Q9H1R3 596 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 LDAHQ9H6V9 325 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 ZDHHC11Q9H8X9 412 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 LIN28AQ9H9Z2 209 aaKnown RBP9.05□□□□□ -0.96
CHFR-220ENST00000541817 SPRR3Q9UBC9 169 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 MAD1L1Q9Y6D9 718 aa9.05□□□□□ -0.96
CHFR-220ENST00000541817 NCKAP5O14513 1909 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 OR2A25A4D2G3 310 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 OR14I1A6ND48 311 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 C2orf81A6NN90 581 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 SGK494L7N484 410 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 SIAH2O43255 324 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 KDM1AO60341 852 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 AVILO75366 819 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 METTL18O95568 372 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 FAM157CP0CG43 387 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 PYGBP11216 843 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 TRHRP34981 398 aaPredicted RBP9.04□□□□□ -0.96
CHFR-220ENST00000541817 BDKRB1P46663 353 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 MAN2A2P49641 1150 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 AGTR2P50052 363 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 ZNF136P52737 540 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 ARFIP2P53365 341 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 HYAL2Q12891 473 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 NAB1Q13506 487 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 NSDHLQ15738 373 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 DBN1Q16643 649 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 FBXL19-AS1Q494R0 122 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 ANKRD20A2Q5SQ80 823 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 ANKRD20A1Q5TYW2 823 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 ANKRD20A3Q5VUR7 823 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 ATG16L1Q676U5 607 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 KIAA0408Q6ZU52 694 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 CAND1Q86VP6 1230 aaKnown RBP9.04□□□□□ -0.96
CHFR-220ENST00000541817 PLD3Q8IV08 490 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 TMEM251Q8N6I4 163 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 C10orf82Q8WW14 230 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 CDKL2Q92772 493 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 THOC1Q96FV9 657 aaKnown RBP9.04□□□□□ -0.96
CHFR-220ENST00000541817 SIGLEC10Q96LC7 697 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 NAT9Q9BTE0 207 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 SGPP1Q9BX95 441 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 AMBRA1Q9C0C7 1298 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 LRTM1Q9HBL6 345 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 SAR1AQ9NR31 198 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 EIF2B3Q9NR50 452 aaKnown RBP9.04□□□□□ -0.96
CHFR-220ENST00000541817 SLC17A7Q9P2U7 560 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms