RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SMPD2O60906 423 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 PEX11AO75192 247 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 CLN5O75503 358 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 SCGB2A1O75556 95 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 KRT36O76013 467 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 OR6B1O95007 311 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 BAG4O95429 457 aaKnown RBP3.83□□□□□ -1.8
SNHG1-217ENST00000541578 PGK2P07205 417 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 DLATP10515 647 aaKnown RBP3.83□□□□□ -1.8
SNHG1-217ENST00000541578 PRKAR1AP10644 381 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 HLA-DOBP13765 273 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 GOT1P17174 413 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 ANP32AP39687 249 aaKnown RBP3.83□□□□□ -1.8
SNHG1-217ENST00000541578 MAZP56270 477 aaKnown RBP3.83□□□□□ -1.8
SNHG1-217ENST00000541578 CLDN17P56750 224 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 SLC26A5P58743 744 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 KRTAP10-6P60371 365 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-217ENST00000541578 SSTP61278 116 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 FKBP1BP68106 108 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 MYL7Q01449 175 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 GAGE5Q13069 117 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 GAGE6Q13070 117 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 KIR2DS3Q14952 304 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 C20orf194Q5TEA3 1177 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 UNC5DQ6UXZ4 953 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 ADAMTSL2Q86TH1 951 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 LAX1Q8IWV1 398 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 RFLNBQ8N5W9 214 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 KLHDC1Q8N7A1 406 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 RNF149Q8NC42 400 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 SLC24A4Q8NFF2 622 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 OR4A16Q8NH70 328 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 U2AF1L4Q8WU68 220 aaKnown RBP3.83□□□□□ -1.8
SNHG1-217ENST00000541578 SECTM1Q8WVN6 248 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 HAS2Q92819 552 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 TMEM143Q96AN5 459 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 C14orf79Q96F83 325 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 SAMD8Q96LT4 415 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF583Q96ND8 569 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 TSGA13Q96PP4 275 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 MAP3K3Q99759 626 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 RHNO1Q9BSD3 238 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 ALKBH7Q9BT30 221 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-217ENST00000541578 TRPV6Q9H1D0 765 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 CARD9Q9H257 536 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 MARCH7Q9H992 704 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 PHPT1Q9NRX4 125 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-217ENST00000541578 ANKMY1Q9P2S6 941 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 COPS7AQ9UBW8 275 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 ERVK-19Q9WJR5 959 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 NUDCQ9Y266 331 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 TONSLQ96HA7 1378 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 TOGARAM1Q9Y4F4 1720 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 TCF20Q9UGU0 1960 aaKnown RBP3.83□□□□□ -1.8
SNHG1-217ENST00000541578 ROCK2O75116 1388 aaKnown RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 FLT4P35916 1363 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 IGHV4OR15-8A0A075B7B6 117 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 ANKDD1BA6NHY2 528 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF587BE7ETH6 402 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 K7EPI3 171 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 O00370 1275 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 CHUKO15111 745 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 BUB3O43684 328 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SOCS5O75159 536 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 HMMRO75330 724 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 RAF1P04049 648 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 CHRNGP07510 517 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 F3P13726 295 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 DARSP14868 501 aaKnown RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 ITGA3P26006 1051 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 ELAVL4P26378 380 aaKnown RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 RPA1P27694 616 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 PKLRP30613 574 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SLC1A3P43003 542 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 NKX2-1P43699 371 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SLC6A12P48065 614 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 NUMBP49757 651 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 CNN1P51911 297 aaKnown RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 FUT6P51993 359 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 HERV-K104P61576 105 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 PITX1P78337 314 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 KCNJ10P78508 379 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 CCZ1BP86790 482 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 CCZ1P86791 482 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 LGALS3BPQ08380 585 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 ZBTB17Q13105 803 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SCGB2A2Q13296 93 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 DPYSQ14117 519 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 ANKDD1AQ495B1 522 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SPDYCQ5MJ68 293 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 DCAF10Q5QP82 559 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 STXBP5Q5T5C0 1151 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SUSD4Q5VX71 490 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 PRAMEF7Q5VXH5 474 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 DLEU7Q6UYE1 221 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 MCM10Q7L590 875 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 SATL1Q86VE3 508 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 CCDC60Q8IWA6 550 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-217ENST00000541578 FBXW8Q8N3Y1 598 aa3.82□□□□□ -1.8
SNHG1-217ENST00000541578 GBP7Q8N8V2 638 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms