RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 NUFIP1Q9UHK0 495 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-207ENST00000541122 PADI2Q9Y2J8 665 aa14.4□□□□□ -0.1
SMARCA4-207ENST00000541122 PEAK1Q9H792 1746 aa14.4□□□□□ -0.1
SMARCA4-207ENST00000541122 TEX13CA0A0J9YWL9 993 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 A0A1W2PQL4 384 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 JUNP05412 331 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 GTF2F2P13984 249 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 VIPR1P32241 457 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 CAP1Q01518 475 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 SLC10A2Q12908 348 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 PPP2R2DQ66LE6 453 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 PGM2L1Q6PCE3 622 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TMEM151AQ8N4L1 468 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 OR2AP1Q8NGE2 309 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 ADAMTS19Q8TE59 1207 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.39□□□□□ -0.111e-10■■■■■ 33
SMARCA4-207ENST00000541122 NDUFAF4Q9P032 175 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 DLGAP4Q9Y2H0 992 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 NAP1L6A6NFF2 107 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 ZNF821O75541 412 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 PLATP00750 562 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 PRKCGP05129 697 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TIA1P31483 386 aaKnown RBP eCLIP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 EIF2DP41214 584 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 RPS5P46782 204 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 PSMD8P48556 350 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 ACTA2P62736 377 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 ACTG2P63267 376 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 HACD4Q5VWC8 232 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 SLC8B1Q6J4K2 584 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 ABHD13Q7L211 337 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 KCTD9Q7L273 389 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 PIWIL3Q7Z3Z3 882 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 ZNF101Q8IZC7 436 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 NUS1Q96E22 293 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 CPNE2Q96FN4 548 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 MCHR1Q99705 422 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 SMOQ99835 787 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 CLDN24A6NM45 220 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 EIF1AYO14602 144 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 NRP1O14786 923 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TLL1O43897 1013 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 AHCYP23526 432 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 NDUFS1P28331 727 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 EIF1AXP47813 144 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 SNRPD2P62316 118 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 COQ10AQ96MF6 247 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 HERPUD2Q9BSE4 406 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 NT5DC2Q9H857 520 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TBC1D3DA0A087WVF3 549 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TBC1D3IA0A087WXS9 549 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TBC1D3EA0A087X179 549 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TBC1D3KA0A087X1G2 549 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TBC1D3FA6NER0 549 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 SLC22A31A6NKX4 558 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TBC1D3LB9A6J9 549 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 ZNF878C9JN71 531 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 PDYNP01213 254 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TBC1D3HP0C7X1 549 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 UQCRC1P31930 480 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 GAS6Q14393 721 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 FGFBP1Q14512 234 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TBC1D3GQ6DHY5 549 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TBC1D3CQ6IPX1 549 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 WDR53Q7Z5U6 358 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TBC1D3Q8IZP1 549 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 POGLUT1Q8NBL1 392 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 GAL3ST3Q96A11 431 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 SYT11Q9BT88 431 aa14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 TRMT61BQ9BVS5 477 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-207ENST00000541122 LOC100509620A0A075B734 347 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 PSMD9O00233 223 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 AQP9O43315 295 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 ERI3O43414 337 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 SORBS2O94875 1100 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 TOXO94900 526 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 ENPP2Q13822 863 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 LRP8Q14114 963 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 TOR1AIP1Q5JTV8 583 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 BEST3Q8N1M1 668 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 UMODL1-AS1Q8N2C9 162 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 C7orf50Q9BRJ6 194 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 TEX51A0A1B0GUA7 166 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 LCKP06239 509 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 PGDP52209 483 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 SH3BP2P78314 561 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 ZNF33BQ06732 778 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 OR2L8Q8NGY9 312 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 LRR1Q96L50 414 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 SRMSQ9H3Y6 488 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 EVA1BQ9NVM1 165 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 FMN2Q9NZ56 1722 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 MEIOCA2RUB1 952 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 ABRAXAS2Q15018 415 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 METTL11BQ5VVY1 283 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 GRHL2Q6ISB3 625 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 OSTM1Q86WC4 334 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 CPA6Q8N4T0 437 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 ACBD7Q8N6N7 88 aa14.38□□□□□ -0.11
SMARCA4-207ENST00000541122 TMEM145Q8NBT3 493 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms