RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 LEXMQ3ZCV2 418 aa10.98□□□□□ -0.65
C11orf54-214ENST00000540113 HEATR4Q86WZ0 1026 aa10.98□□□□□ -0.65
C11orf54-214ENST00000540113 SVOPQ8N4V2 548 aa10.98□□□□□ -0.65
C11orf54-214ENST00000540113 CHPT1Q8WUD6 406 aa10.98□□□□□ -0.65
C11orf54-214ENST00000540113 TFGQ92734 400 aaPredicted RBP10.98□□□□□ -0.65
C11orf54-214ENST00000540113 ROGDIQ9GZN7 287 aa10.98□□□□□ -0.65
C11orf54-214ENST00000540113 CERS4Q9HA82 394 aa10.98□□□□□ -0.65
C11orf54-214ENST00000540113 ACER3Q9NUN7 267 aa10.98□□□□□ -0.65
C11orf54-214ENST00000540113 DPP7Q9UHL4 492 aa10.98□□□□□ -0.65
C11orf54-214ENST00000540113 ANKDD1BA6NHY2 528 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 EFCAB9A8MZ26 197 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 E9PQ18 207 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 GASTP01350 101 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 ZNF12P17014 697 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 GADD45AP24522 165 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 FCHO2Q0JRZ9 810 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 DNASE1L3Q13609 305 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 ZNF846Q147U1 533 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 MAPK11Q15759 364 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 PIP5KL1Q5T9C9 394 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 TRIM40Q6P9F5 258 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 CEACAM20Q6UY09 585 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 GET4Q7L5D6 327 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-214ENST00000540113 SZRD1Q7Z422 152 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 SLC9B2Q86UD5 537 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 RBM45Q8IUH3 476 aaKnown RBP10.97□□□□□ -0.65
C11orf54-214ENST00000540113 VANGL1Q8TAA9 524 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-214ENST00000540113 EXOSC8Q96B26 276 aaKnown RBP10.97□□□□□ -0.65
C11orf54-214ENST00000540113 PPP1R16AQ96I34 528 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 COX14Q96I36 57 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 ALPK1Q96QP1 1244 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 SIGLEC11Q96RL6 698 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 PRSS16Q9NQE7 514 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 ITM2CQ9NQX7 267 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 TRNAU1APQ9NX07 287 aaKnown RBP10.97□□□□□ -0.65
C11orf54-214ENST00000540113 PSORS1C1Q9UIG5 152 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 OR1A2Q9Y585 309 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 SZT2Q5T011 3432 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 LOC100506127A0A0U1RQW1 187 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 C17orf113A0A1B0GUU1 675 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 IGLON5A6NGN9 336 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 SH3BP5O60239 455 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 B4GALT2O60909 372 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 PRKRAO75569 313 aaKnown RBP10.97□□□□□ -0.65
C11orf54-214ENST00000540113 DNAJB5O75953 348 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 GADD45GO95257 159 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 EPHX1P07099 455 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 HSMCR30P0CW71 290 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 FEN1P39748 380 aaKnown RBP10.97□□□□□ -0.65
C11orf54-214ENST00000540113 LIM2P55344 173 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 DSTNP60981 165 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 DOC2BQ14184 412 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 PUM1Q14671 1186 aaKnown RBP eCLIP10.97□□□□□ -0.65
C11orf54-214ENST00000540113 TCEA2Q15560 299 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 DGUOKQ16854 277 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 TANGO2Q6ICL3 276 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 FAM129CQ86XR2 697 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 DNAJC22Q8N4W6 341 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 OXR1Q8N573 874 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 AQP11Q8NBQ7 271 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 CXorf40AQ8TE69 158 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 CXorf40BQ96DE9 158 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 ZHX1-C8orf76Q96EF9 292 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 ZNF717Q9BY31 904 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-214ENST00000540113 DPEP2Q9H4A9 486 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 XKR8Q9H6D3 395 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 NECTIN3Q9NQS3 549 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 DYRK4Q9NR20 520 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 DUSP12Q9UNI6 340 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 GPR34Q9UPC5 381 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 NUMA1Q14980 2115 aa10.97□□□□□ -0.65
C11orf54-214ENST00000540113 TBC1D3BA6NDS4 549 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 PRR23AA6NEV1 266 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 FFAR1O14842 300 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 PI15O43692 258 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 VEGFDO43915 354 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 PTHP01270 115 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 ARAFP10398 606 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 PTX3P26022 381 aaPredicted RBP10.96□□□□□ -0.65
C11orf54-214ENST00000540113 XCR1P46094 333 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 CLK1P49759 484 aaKnown RBP10.96□□□□□ -0.65
C11orf54-214ENST00000540113 BCAP31P51572 246 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 MAPK12P53778 367 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 MANFP55145 182 aaKnown RBP10.96□□□□□ -0.65
C11orf54-214ENST00000540113 PTGES3Q15185 160 aaKnown RBP10.96□□□□□ -0.65
C11orf54-214ENST00000540113 TIGD6Q17RP2 521 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 TRIM16LQ309B1 348 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 VITQ6UXI7 678 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 ZNF605Q86T29 641 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 AMZ2Q86W34 360 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 MFSD4AQ8N468 514 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 RHOXF1Q8NHV9 184 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 IPCEF1Q8WWN9 437 aaPredicted RBP10.96□□□□□ -0.65
C11orf54-214ENST00000540113 SUSD6Q92537 303 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 RAD51AP1Q96B01 352 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 TM4SF18Q96CE8 201 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 ZNF514Q96K75 400 aaPredicted RBP10.96□□□□□ -0.65
C11orf54-214ENST00000540113 PIP5K1AQ99755 562 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 ITPAQ9BY32 194 aa10.96□□□□□ -0.65
C11orf54-214ENST00000540113 HDAC8Q9BY41 377 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms