RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 RDH10Q8IZV5 341 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 VWA5B2Q8N398 1253 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 CREB3L4Q8TEY5 395 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 REPS1Q96D71 796 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 MAPKAP1Q9BPZ7 522 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 KLF16Q9BXK1 252 aaPredicted RBP13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 ZNF282Q9UDV7 671 aaPredicted RBP13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 HYKKA2RU49 373 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 ICMTO60725 284 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 EOMESO95936 686 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 CHI3L1P36222 383 aaPredicted RBP13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 BDKRB1P46663 353 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 MEF2AQ02078 507 aaPredicted RBP13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 EEF1A2Q05639 463 aaKnown RBP13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 ASAH1Q13510 395 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 IRF5Q13568 498 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 LIPJQ5W064 366 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 CEACAM20Q6UY09 585 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 OR4M1Q8NGD0 313 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 SLC25A46Q96AG3 418 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 TMEM80Q96HE8 168 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 WRAP53Q9BUR4 548 aaKnown RBP13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 BRD9Q9H8M2 597 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 REV1Q9UBZ9 1251 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 SH2B3Q9UQQ2 575 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 ENPP4Q9Y6X5 453 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 HEPACAM2A8MVW5 462 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 FADS2P1A8MWK0 482 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 CKBP12277 381 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 RPS5P46782 204 aaKnown RBP13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 MAN2A2P49641 1150 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 RAB25P57735 213 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 RHAGQ02094 409 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 TEKQ02763 1124 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 TATDN3Q17R31 274 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 OR2G6Q5TZ20 316 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 MEX3DQ86XN8 651 aaKnown RBP13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 WDR48Q8TAF3 677 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 HCAR2Q8TDS4 363 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 CHTF18Q8WVB6 975 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 GEMIN6Q8WXD5 167 aaKnown RBP13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 KLHL6Q8WZ60 621 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 TM9SF2Q99805 663 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 SPATA9Q9BWV2 254 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 TSSK6Q9BXA6 273 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 NDUFB11Q9NX14 153 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 SEC14L4Q9UDX3 406 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 ZNF780AO75290 641 aaPredicted RBP13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 CRYZL1O95825 349 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 SLC16A8O95907 504 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 TGFB1P01137 390 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 PSKH1P11801 424 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 ETV5P41161 510 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 ETV1P50549 477 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 P2RY14Q15391 338 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 ANXA8L1Q5VT79 327 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 HMGN2P46Q86SG4 172 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 ZFP41Q8N8Y5 198 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 OR52N2Q8NGI0 321 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 OR5H6Q8NGV6 325 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 MYLIPQ8WY64 445 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 RIPOR3Q96MK2 946 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 WDFY2Q96P53 400 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 SORBS1Q9BX66 1292 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 OR51B5Q9H339 312 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 SSR3Q9UNL2 185 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 CORO2BQ9UQ03 480 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 ZSCAN5BA6NJL1 495 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 RNASET2O00584 256 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 CYBAP13498 195 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 ATP1B2P14415 290 aaPredicted RBP13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 POLR2EP19388 210 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 TNNI3P19429 210 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 PPIBP23284 216 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 HMGA2P52926 109 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 ATN1P54259 1190 aaPredicted RBP13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 FAPQ12884 760 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 CDKL4Q5MAI5 379 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 AGTRAPQ6RW13 159 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 USP30Q70CQ3 517 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 ARMCX6Q7L4S7 300 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 C11orf74Q86VG3 221 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 SLC38A6Q8IZM9 456 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 NANOGP1Q8N7R0 232 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 NEIL2Q969S2 332 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 GFM1Q96RP9 751 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 TVP23BQ9NYZ1 205 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 TRPM5Q9NZQ8 1165 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 COMMD3Q9UBI1 195 aa13.28□□□□□ -0.28
SCNN1A-215ENST00000540037 SLC35F4A4IF30 521 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 C12orf71A8MTZ7 269 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 OR10H3O60404 316 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 ADAMTS4O75173 837 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 ALPPP05187 535 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 TIA1P31483 386 aaKnown RBP eCLIP13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 CD70P32970 193 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 ATAT1Q5SQI0 421 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 SIGIRRQ6IA17 410 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 TMPRSS11BQ86T26 416 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms