RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 EHD3Q9NZN3 535 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 EGFL7Q9UHF1 273 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 PCDHGB4Q9UN71 923 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 TNRC6BQ9UPQ9 1833 aaKnown RBP16.03■□□□□ 0.16
COPS3-212ENST00000539941 DENRO43583 198 aaKnown RBP16.03■□□□□ 0.16
COPS3-212ENST00000539941 GMNNO75496 209 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 CLPTM1O96005 669 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 GSNP06396 782 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 FAM58BPP0C7Q3 252 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 ATP5A1P25705 553 aaKnown RBP16.03■□□□□ 0.16
COPS3-212ENST00000539941 SLC7A1P30825 629 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 CAPZBP47756 277 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 LSSP48449 732 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 OR4D2P58180 307 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 CSTF1Q05048 431 aaKnown RBP16.03■□□□□ 0.16
COPS3-212ENST00000539941 DEFB133Q30KQ1 61 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 MRM1Q6IN84 353 aaKnown RBP16.03■□□□□ 0.16
COPS3-212ENST00000539941 ZNF621Q6ZSS3 439 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 SATL1Q86VE3 508 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 TMEM126BQ8IUX1 230 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 PQLC1Q8N2U9 271 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 ZNF655Q8N720 491 aaPredicted RBP16.03■□□□□ 0.16
COPS3-212ENST00000539941 TRIML2Q8N7C3 387 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 ACOT4Q8N9L9 421 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 CATSPER1Q8NEC5 780 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 OR10A6Q8NH74 314 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 FAM120BQ96EK7 910 aaKnown RBP16.03■□□□□ 0.16
COPS3-212ENST00000539941 EFHD1Q9BUP0 239 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 YIPF2Q9BWQ6 316 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 SYNPO2LQ9H987 977 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 PLGRKTQ9HBL7 147 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 LYARQ9NX58 379 aaKnown RBP16.03■□□□□ 0.16
COPS3-212ENST00000539941 TAS2R7Q9NYW3 318 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 FBXO4Q9UKT5 387 aa16.03■□□□□ 0.16
COPS3-212ENST00000539941 ELOVL7A1L3X0 281 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 CLIC1O00299 241 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 SDC3O75056 442 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 GPIP06744 558 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 PROS1P07225 676 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 UMPSP11172 480 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 TYRP1P17643 537 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 GPX2P18283 190 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 GGT1P19440 569 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 ARRB1P49407 418 aaPredicted RBP16.02■□□□□ 0.16
COPS3-212ENST00000539941 EMP3P54852 163 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 PLK5Q496M5 336 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 C6orf132Q5T0Z8 1188 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 UGT2A3Q6UWM9 527 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 RBM44Q6ZP01 1051 aaKnown RBP16.02■□□□□ 0.16
COPS3-212ENST00000539941 GPR155Q7Z3F1 870 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 PATL1Q86TB9 770 aaKnown RBP16.02■□□□□ 0.16
COPS3-212ENST00000539941 SERPINA11Q86U17 422 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 MAML2Q8IZL2 1156 aaPredicted RBP16.02■□□□□ 0.16
COPS3-212ENST00000539941 ICA1LQ8NDH6 482 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 OR4A15Q8NGL6 344 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 POP5Q969H6 163 aaKnown RBP16.02■□□□□ 0.16
COPS3-212ENST00000539941 RERGQ96A58 199 aaPredicted RBP16.02■□□□□ 0.16
COPS3-212ENST00000539941 REXO5Q96IC2 774 aaKnown RBP16.02■□□□□ 0.16
COPS3-212ENST00000539941 SPATA9Q9BWV2 254 aa16.02■□□□□ 0.16
COPS3-212ENST00000539941 COPS7BQ9H9Q2 264 aaPredicted RBP16.02■□□□□ 0.16
COPS3-212ENST00000539941 ZFHX2Q9C0A1 2572 aaPredicted RBP16.02■□□□□ 0.16
COPS3-212ENST00000539941 C1orf226A1L170 272 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 C4orf51C9J302 202 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 CASQ2O14958 399 aaPredicted RBP16.02■□□□□ 0.15
COPS3-212ENST00000539941 TNFAIP8O95379 198 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 ZNF10P21506 573 aaPredicted RBP16.02■□□□□ 0.15
COPS3-212ENST00000539941 HSPA13P48723 471 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 GZMMP51124 257 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 SUZ12Q15022 739 aaKnown RBP16.02■□□□□ 0.15
COPS3-212ENST00000539941 MPEG1Q2M385 716 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 GLYATQ6IB77 296 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 DHRS4L2Q6PKH6 230 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 Q6ZNX1 250 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 MICU2Q8IYU8 434 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 OR52E4Q8NGH9 312 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 OR8K5Q8NH50 307 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 AURKBQ96GD4 344 aaPredicted RBP16.02■□□□□ 0.15
COPS3-212ENST00000539941 ELF4Q99607 663 aaPredicted RBP16.02■□□□□ 0.15
COPS3-212ENST00000539941 MACROD1Q9BQ69 325 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 RAB33BQ9H082 229 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 RBM38Q9H0Z9 239 aaKnown RBP16.02■□□□□ 0.15
COPS3-212ENST00000539941 ZNF696Q9H7X3 374 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 GORASP2Q9H8Y8 452 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 TPT1P8Q9HAU6 139 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 UCKL1Q9NWZ5 548 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 TAS2R9Q9NYW1 312 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 PILRBQ9UKJ0 227 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 ERVK-11Q9UQG0 969 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 ASB4Q9Y574 426 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 AP4S1Q9Y587 144 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 SNX11Q9Y5W9 270 aa16.02■□□□□ 0.15
COPS3-212ENST00000539941 GOLGA4Q13439 2230 aaKnown RBP16.01■□□□□ 0.15
COPS3-212ENST00000539941 A0A1W2PRB8 838 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 DHRS12A0PJE2 317 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 SH3PXD2BA1X283 911 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 PROB1E7EW31 1015 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 C6orf47O95873 294 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 STATHP02808 62 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 ABCB1P08183 1280 aaPredicted RBP16.01■□□□□ 0.15
COPS3-212ENST00000539941 SMIM10L1P0DMW3 83 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms