RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ZNF793Q6ZN11 406 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 VN1R4Q7Z5H5 301 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 PATL1Q86TB9 770 aaKnown RBP16.28■□□□□ 0.2
LTBR-207ENST00000539925 HIPK1Q86Z02 1210 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 FAM20CQ8IXL6 584 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 ST13P4Q8IZP2 240 aaPredicted RBP16.28■□□□□ 0.2
LTBR-207ENST00000539925 FAM160A2Q8N612 972 aaPredicted RBP16.28■□□□□ 0.2
LTBR-207ENST00000539925 SFXN5Q8TD22 340 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 ANKRD60Q9BZ19 345 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 AICDAQ9GZX7 198 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 KLHL31Q9H511 634 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 SMPD3Q9NY59 655 aaPredicted RBP16.28■□□□□ 0.2
LTBR-207ENST00000539925 UTS2RQ9UKP6 389 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 C7orf72A4D263 438 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 TMEM247A6NEH6 219 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 LILRA5A6NI73 299 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 STK25O00506 426 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 TNFAIP8O95379 198 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 ARAFP10398 606 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 BUD31P41223 144 aaPredicted RBP16.27■□□□□ 0.2
LTBR-207ENST00000539925 ALDH3A2P51648 485 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 SCARB2Q14108 478 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 TCEA2Q15560 299 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 SPDYE7PQ495Y7 208 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 WDR45BQ5MNZ6 344 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 RNF44Q7L0R7 432 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 PIWIL3Q7Z3Z3 882 aaKnown RBP16.27■□□□□ 0.2
LTBR-207ENST00000539925 ZDHHC21Q8IVQ6 265 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 OR8K5Q8NH50 307 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 OR5K1Q8NHB7 308 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 FAM110BQ8TC76 370 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 TMBIM1Q969X1 311 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 EXOSC8Q96B26 276 aaKnown RBP16.27■□□□□ 0.2
LTBR-207ENST00000539925 BBS4Q96RK4 519 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 TM9SF3Q9HD45 589 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 IFT80Q9P2H3 777 aaPredicted RBP16.27■□□□□ 0.2
LTBR-207ENST00000539925 PADI4Q9UM07 663 aa16.27■□□□□ 0.2
LTBR-207ENST00000539925 CCDC163A0A0D9SF12 145 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 G3V2T6 193 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 PDE9AO76083 593 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 FABP3P05413 133 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 CSNK2A2P19784 350 aaPredicted RBP16.27■□□□□ 0.19
LTBR-207ENST00000539925 HOXA6P31267 233 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 TLX1P31314 330 aaPredicted RBP16.27■□□□□ 0.19
LTBR-207ENST00000539925 DSTNP60981 165 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 CDK6Q00534 326 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 DAG1Q14118 895 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 RFX4Q33E94 735 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.27■□□□□ 0.19
LTBR-207ENST00000539925 C6orf52Q5T4I8 152 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 FCRL6Q6DN72 434 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 NIPAL1Q6NVV3 410 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 SLC48A1Q6P1K1 146 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 UGT2A3Q6UWM9 527 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 RNF130Q86XS8 419 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 CHERPQ8IWX8 916 aaKnown RBP16.27■□□□□ 0.19
LTBR-207ENST00000539925 DEFB123Q8N688 67 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 FAM86B1Q8N7N1 296 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 DNASE2BQ8WZ79 361 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 TFAP2CQ92754 450 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 NRBF2Q96F24 287 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 RBM4BQ9BQ04 359 aaKnown RBP16.27■□□□□ 0.19
LTBR-207ENST00000539925 RBM4Q9BWF3 364 aaKnown RBP16.27■□□□□ 0.19
LTBR-207ENST00000539925 TRIM4Q9C037 500 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 CXorf36Q9H7Y0 433 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 NTN4Q9HB63 628 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 A4GALTQ9NPC4 353 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 USE1Q9NZ43 259 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 RAPGEFL1Q9UHV5 662 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 POMT2Q9UKY4 750 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 SIT1Q9Y3P8 196 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 SNX8Q9Y5X2 465 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 SPACA6W5XKT8 324 aa16.27■□□□□ 0.19
LTBR-207ENST00000539925 H0YAE9 185 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 UPK1AO00322 258 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 EI24O14681 340 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 PROM1O43490 865 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 B3GALT2O43825 422 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 UBTFL6P0CB48 400 aaPredicted RBP16.26■□□□□ 0.19
LTBR-207ENST00000539925 SMIM10L1P0DMW3 83 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 NR2F6P10588 404 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 ETFAP13804 333 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 MPIP34949 423 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 ARSFP54793 590 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 BTN3A2P78410 334 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 MERTKQ12866 999 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 NKG7Q16617 165 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 ZNF542PQ5EBM4 170 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 CRB2Q5IJ48 1285 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 Q7L0L9 218 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 CARM1Q86X55 608 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 DHRSXQ8N5I4 330 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 FRMD1Q8N878 549 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 UTP15Q8TED0 518 aaKnown RBP16.26■□□□□ 0.19
LTBR-207ENST00000539925 SMIM10Q96HG1 83 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 CNBD2Q96M20 576 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 AMDHD1Q96NU7 426 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 DOHHQ9BU89 302 aa16.26■□□□□ 0.19
LTBR-207ENST00000539925 DUSP15Q9H1R2 295 aaPredicted RBP16.26■□□□□ 0.19
LTBR-207ENST00000539925 SEMA6CQ9H3T2 930 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms