RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 TIA1P31483 386 aaKnown RBP eCLIP13.96□□□□□ -0.17
CACNB1-206ENST00000539338 CDKN1CP49918 316 aaPredicted RBP13.96□□□□□ -0.17
CACNB1-206ENST00000539338 MLF2Q15773 248 aaPredicted RBP13.96□□□□□ -0.17
CACNB1-206ENST00000539338 COL13A1Q5TAT6 717 aaPredicted RBP13.96□□□□□ -0.17
CACNB1-206ENST00000539338 PM20D1Q6GTS8 502 aa13.96□□□□□ -0.17
CACNB1-206ENST00000539338 NIPAL1Q6NVV3 410 aa13.96□□□□□ -0.17
CACNB1-206ENST00000539338 YIPF7Q8N8F6 280 aa13.96□□□□□ -0.17
CACNB1-206ENST00000539338 OR2AJ1Q8NGZ0 328 aa13.96□□□□□ -0.17
CACNB1-206ENST00000539338 FUBP1Q96AE4 644 aaKnown RBP13.96□□□□□ -0.17
CACNB1-206ENST00000539338 TTYH2Q9BSA4 534 aa13.96□□□□□ -0.17
CACNB1-206ENST00000539338 CMAHPQ9Y471 501 aa13.96□□□□□ -0.17
CACNB1-206ENST00000539338 A0A0U1RQS6 177 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 A0A1B0GVT2 93 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 RNF144AP50876 292 aaPredicted RBP13.96□□□□□ -0.18
CACNB1-206ENST00000539338 HNRNPA0Q13151 305 aaKnown RBP13.96□□□□□ -0.18
CACNB1-206ENST00000539338 COL9A2Q14055 689 aaPredicted RBP13.96□□□□□ -0.18
CACNB1-206ENST00000539338 DOC2AQ14183 400 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 C4orf46Q504U0 113 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF805Q5CZA5 627 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 PAMR1Q6UXH9 720 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 HACD2Q6Y1H2 254 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 TMCO2Q7Z6W1 182 aaPredicted RBP13.96□□□□□ -0.18
CACNB1-206ENST00000539338 APCDD1Q8J025 514 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 VN1R2Q8NFZ6 395 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 MCHR1Q99705 422 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 PCTPQ9UKL6 214 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 MKLN1Q9UL63 735 aa13.96□□□□□ -0.18
CACNB1-206ENST00000539338 GRXCR1A8MXD5 290 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 RAB36O95755 333 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 MLLT3P42568 568 aaPredicted RBP13.95□□□□□ -0.18
CACNB1-206ENST00000539338 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.95□□□□□ -0.18
CACNB1-206ENST00000539338 QSOX2Q6ZRP7 698 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 TRIM73Q86UV7 250 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 EHD1Q9H4M9 534 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF696Q9H7X3 374 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 GNG8Q9UK08 70 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 CCDC88AQ3V6T2 1871 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 CRYBG1Q9Y4K1 1723 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF860A6NHJ4 632 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 IGHEP01854 428 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 GJA5P36382 358 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 TNFRSF4P43489 277 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 IST1P53990 364 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 RPS26P62854 115 aaKnown RBP13.95□□□□□ -0.18
CACNB1-206ENST00000539338 SORCS1Q8WY21 1168 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 L3HYPDHQ96EM0 354 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 PDE7BQ9NP56 450 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 FAM118AQ9NWS6 357 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 LYARQ9NX58 379 aaKnown RBP13.95□□□□□ -0.18
CACNB1-206ENST00000539338 PCDHGA7Q9Y5G6 932 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 TRPM3Q9HCF6 1732 aaPredicted RBP13.95□□□□□ -0.18
CACNB1-206ENST00000539338 A8MV72 311 aaPredicted RBP13.95□□□□□ -0.18
CACNB1-206ENST00000539338 PLOD2O00469 737 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 CAPN3P20807 821 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 ERVPABLB-1P60509 514 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 ADAM15Q13444 863 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 CAMK1Q14012 370 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 PON3Q15166 354 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 ANKRD54Q6NXT1 300 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 MCCC2Q9HCC0 563 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 NAV1Q8NEY1 1877 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 TNFRSF10BO14763 440 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 PAK4O96013 591 aaPredicted RBP13.95□□□□□ -0.18
CACNB1-206ENST00000539338 HPRP00739 348 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF527Q8NB42 609 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 PTERQ96BW5 349 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 SORT1Q99523 831 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 ASPNQ9BXN1 380 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 CST11Q9H112 138 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 SPHK2Q9NRA0 654 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 ACSL6Q9UKU0 697 aa13.95□□□□□ -0.18
CACNB1-206ENST00000539338 BLOC1S5-TXNDC5H3BN57 136 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 MPC1LP0DKB6 136 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 CD9P21926 228 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 TBPL1P62380 186 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 SPATC1Q76KD6 591 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 TSPAN33Q86UF1 283 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 OR2L3Q8NG85 312 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 OR51G2Q8NGK0 314 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 KCNK13Q9HB14 408 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 Q9N2J8 555 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 BAIAP2Q9UQB8 552 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 OR14I1A6ND48 311 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 CAPN14A8MX76 684 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 CCRL2O00421 344 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 TRAM2Q15035 370 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 LIPKQ5VXJ0 399 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 SUN5Q8TC36 379 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 PMM1Q92871 262 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 SERTAD3Q9UJW9 196 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 SPO11Q9Y5K1 396 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 MYH1P12882 1939 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 GLI3P10071 1580 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 MRPL3P09001 348 aaKnown RBP13.94□□□□□ -0.18
CACNB1-206ENST00000539338 TYRP1P17643 537 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 IL4RP24394 825 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 ATP5A1P25705 553 aaKnown RBP13.94□□□□□ -0.18
CACNB1-206ENST00000539338 HMGCLP35914 325 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 FAM189BP81408 668 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms