RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PARK7Q99497 189 aaKnown RBP17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 C17orf62Q9BQA9 187 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 ACAT2Q9BWD1 397 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 GPATCH2Q9NW75 528 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 ENPP4Q9Y6X5 453 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 PRR23AA6NEV1 266 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 TSC22D2O75157 780 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 RHOCP08134 193 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 ALPIP09923 528 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 NAGAP17050 411 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 RHCEP18577 417 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 STK19P49842 368 aaPredicted RBP17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 POU6F2P78424 691 aaPredicted RBP17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 CYP27C1Q4G0S4 372 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 PAQR6Q6TCH4 344 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 CAMKMTQ7Z624 323 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 PLEKHH3Q7Z736 793 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 ADGRG2Q8IZP9 1017 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 TAGAPQ8N103 731 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 TMEM145Q8NBT3 493 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 TMEM203Q969S6 136 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 GPR137Q96N19 417 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 SLC6A18Q96N87 628 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 GFM1Q96RP9 751 aaKnown RBP17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 GALNT9Q9HCQ5 603 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 MRPL39Q9NYK5 338 aaKnown RBP17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 CRLS1Q9UJA2 301 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 SNTNA6NMZ2 147 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 ACSL4O60488 711 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 ZNF623O75123 536 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 CLDN11O75508 207 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 SCO1O75880 301 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 ADAP00813 363 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 ASMTP46597 345 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 HNMTP50135 292 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 DGKEP52429 567 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 ZNF33BQ06732 778 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 GRB14Q14449 540 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 SF3A2Q15428 464 aaKnown RBP17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 COX20Q5RI15 118 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 CNIH2Q6PI25 160 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 TEX261Q6UWH6 196 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 FAM92BQ6ZTR7 304 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 UBE2R2Q712K3 238 aaPredicted RBP17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 SLC37A3Q8NCC5 494 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 OR4A15Q8NGL6 344 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 KCNJ15Q99712 375 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 TSSK6Q9BXA6 273 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 IL26Q9NPH9 171 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 U3KQ87 197 aa17.76■□□□□ 0.43
SFSWAP-207ENST00000538548 BTN3A3O00478 584 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 IFNA14P01570 189 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 OSMP13725 252 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 TNNI3P19429 210 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 PTBP1P26599 531 aaKnown RBP eCLIP17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 RGS1Q08116 209 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 CHIT1Q13231 466 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 PXDC1Q5TGL8 231 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 NFKBIDQ8NI38 313 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 TMEM43Q9BTV4 400 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 SLC12A9Q9BXP2 914 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 CCSER2Q9H7U1 834 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 SYNDIG1Q9H7V2 258 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 B3GAT2Q9NPZ5 323 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 DNAJC11Q9NVH1 559 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 PHF11Q9UIL8 331 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 SLC22A14Q9Y267 594 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 PRAMEF33A0A0G2JMD5 474 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 INMT-MINDY4F8WBC2 141 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 PRAMEF10O60809 474 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 HIST1H2AGP0C0S8 130 aaPredicted RBP17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 HIST1H2ADP20671 130 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 IRS1P35568 1242 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 FEN1P39748 380 aaKnown RBP17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 ILKQ13418 452 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 CRB2Q5IJ48 1285 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 ANKRD54Q6NXT1 300 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 OR8J1Q8NGP2 316 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 TMEM163Q8TC26 289 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 CREB3L1Q96BA8 519 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 C11orf24Q96F05 449 aaPredicted RBP17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 HIST1H2AHQ96KK5 128 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 HIST1H2AJQ99878 128 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 H2AFJQ9BTM1 129 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 COMMD3Q9UBI1 195 aa17.75■□□□□ 0.43
SFSWAP-207ENST00000538548 OAZ2O95190 189 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 CTSHP09668 335 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 CASP9P55211 416 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 LRRC74AQ0VAA2 488 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 SUZ12Q15022 739 aaKnown RBP17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 LEXMQ3ZCV2 418 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 PLK5Q496M5 336 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 CASP12Q6UXS9 341 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 ABI3BPQ7Z7G0 1075 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 GHDCQ8N2G8 530 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 TTC9BQ8N6N2 239 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 OR52P1PQ8NH57 321 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 MTERF3Q96E29 417 aa17.74■□□□□ 0.43
SFSWAP-207ENST00000538548 PIGUQ9H490 435 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms