RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ALDH3B1P43353 468 aa3.17□□□□□ -1.9
CCDC7-208ENST00000537047 ARMCX4Q5H9R4 360 aa3.17□□□□□ -1.9
CCDC7-208ENST00000537047 KRBOX4Q5JUW0 171 aa3.17□□□□□ -1.9
CCDC7-208ENST00000537047 SLC43A2Q8N370 569 aa3.17□□□□□ -1.9
CCDC7-208ENST00000537047 ZNF491Q8N8L2 437 aa3.17□□□□□ -1.9
CCDC7-208ENST00000537047 IQUBQ8NA54 791 aa3.17□□□□□ -1.9
CCDC7-208ENST00000537047 VPS33AQ96AX1 596 aa3.17□□□□□ -1.9
CCDC7-208ENST00000537047 CNDP2Q96KP4 475 aaKnown RBP3.17□□□□□ -1.9
CCDC7-208ENST00000537047 PFDN4Q9NQP4 134 aa3.17□□□□□ -1.9
CCDC7-208ENST00000537047 IGKV6-21A0A0C4DH24 114 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 TCP11X1B4DZS4 312 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 UBE2CO00762 179 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 FIBPO43427 364 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 SKILP12757 684 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 MFAP3P55082 362 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 NUCB1Q02818 461 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 PAX2Q02962 417 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 KIAA0040Q15053 153 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 TGIF1Q15583 401 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 FAM174BQ3ZCQ3 159 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 CELF3Q5SZQ8 465 aaKnown RBP3.16□□□□□ -1.9
CCDC7-208ENST00000537047 CCDC186Q7Z3E2 898 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 GPR141Q7Z602 305 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 PHLDB2Q86SQ0 1253 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 EBF4Q9BQW3 602 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 NAA11Q9BSU3 229 aaPredicted RBP3.16□□□□□ -1.9
CCDC7-208ENST00000537047 NACAP1Q9BZK3 213 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 NMUR1Q9HB89 426 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 SNX7Q9UNH6 387 aa3.16□□□□□ -1.9
CCDC7-208ENST00000537047 TSPY2A6NKD2 308 aa3.15□□□□□ -1.91
CCDC7-208ENST00000537047 A8MXE2 369 aa3.15□□□□□ -1.91
CCDC7-208ENST00000537047 EIF5BO60841 1220 aaKnown RBP3.15□□□□□ -1.91
CCDC7-208ENST00000537047 ID1P41134 155 aa3.15□□□□□ -1.91
CCDC7-208ENST00000537047 GMPSP49915 693 aaPredicted RBP3.15□□□□□ -1.91
CCDC7-208ENST00000537047 RFTN2Q52LD8 501 aaPredicted RBP3.15□□□□□ -1.91
CCDC7-208ENST00000537047 SLC27A4Q6P1M0 643 aa3.15□□□□□ -1.91
CCDC7-208ENST00000537047 ERN2Q76MJ5 926 aaKnown RBP3.15□□□□□ -1.91
CCDC7-208ENST00000537047 NME8Q8N427 588 aa3.15□□□□□ -1.91
CCDC7-208ENST00000537047 FRAT1Q92837 279 aaPredicted RBP3.15□□□□□ -1.91
CCDC7-208ENST00000537047 SLC35C1Q96A29 364 aa3.15□□□□□ -1.91
CCDC7-208ENST00000537047 AK8Q96MA6 479 aa3.15□□□□□ -1.91
CCDC7-208ENST00000537047 SWAP70Q9UH65 585 aa3.15□□□□□ -1.91
CCDC7-208ENST00000537047 KAT6BQ8WYB5 2073 aa3.15□□□□□ -1.91
CCDC7-208ENST00000537047 EPOPA6NHQ4 379 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 CCT8L1PA6NM43 557 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 STAM2O75886 525 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 SLC25A1P53007 311 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 PPP5CP53041 499 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 UGCGQ16739 394 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 HYAL4Q2M3T9 481 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 LSMEM1Q8N8F7 131 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 CCDC191Q8NCU4 936 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 TNMDQ9H2S6 317 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 ISG20L2Q9H9L3 353 aaKnown RBP3.14□□□□□ -1.91
CCDC7-208ENST00000537047 CCL27Q9Y4X3 112 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 LIPGQ9Y5X9 500 aa3.14□□□□□ -1.91
CCDC7-208ENST00000537047 CFAP65Q6ZU64 1925 aaKnown RBP3.14□□□□□ -1.91
CCDC7-208ENST00000537047 OR5H15A6NDH6 313 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 ZFP92A6NM28 416 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 NPIPA3F8WFD2 350 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 P2RX6O15547 441 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 TBX10O75333 385 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 PGLSO95336 258 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 FGF19O95750 216 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 SPP1P10451 314 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 MDKP21741 143 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-208ENST00000537047 CDX1P47902 265 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-208ENST00000537047 AGAP6Q5VW22 663 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 LIPJQ5W064 366 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 C16orf54Q6UWD8 224 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 ENTHD1Q8IYW4 607 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 CEND1Q8N111 149 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 CCAR2Q8N163 923 aaKnown RBP3.13□□□□□ -1.91
CCDC7-208ENST00000537047 SAMD12Q8N8I0 201 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 CCDC89Q8N998 374 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 KIF18AQ8NI77 898 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 ZNF671Q8TAW3 534 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 TBCKQ8TEA7 893 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 RNF138Q8WVD3 245 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 MAGEB18Q96M61 343 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 FERMT1Q9BQL6 677 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 CENPOQ9BU64 300 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 IKZF5Q9H5V7 419 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 NT5DC2Q9H857 520 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 ANAPC5Q9UJX4 755 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 RNF24Q9Y225 148 aa3.13□□□□□ -1.91
CCDC7-208ENST00000537047 ANXA2P2A6NMY6 339 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 NEDD8-MDP1E9PL57 170 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 CCDC188H7C350 402 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 MCF2LO15068 1137 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 CPN1P15169 458 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 SLC1A3P43003 542 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 OR3A3P47888 321 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 NDST1P52848 882 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 PPA1Q15181 289 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 C1orf141Q5JVX7 400 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 SPOUT1Q5T280 376 aaKnown RBP3.12□□□□□ -1.91
CCDC7-208ENST00000537047 RFPL4BQ6ZWI9 263 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 SPATA21Q7Z572 469 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 DNAJB7Q7Z6W7 309 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms