RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	IFI44L	Q53G44	452 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	ZNF776	Q68DI1	518 aa	Predicted RBP	2.7	□□□□□ -1.98
RDX-215	ENST00000533961	ZNF730	Q6ZMV8	503 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	ZNF841	Q6ZN19	808 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	MSANTD1	Q6ZTZ1	278 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	KLHDC8A	Q8IYD2	350 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	FAM9B	Q8IZU0	186 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	NUP93	Q8N1F7	819 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	LINC00612	Q8N6U2	182 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	CCDC197	Q8NCU1	140 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	TRPV3	Q8NET8	790 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	ST7L	Q8TDW4	575 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	AFAP1L1	Q8TED9	768 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	CHURC1	Q8WUH1	139 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	C17orf62	Q9BQA9	187 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	CHCHD5	Q9BSY4	110 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	NTMT1	Q9BV86	223 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	PUS3	Q9BZE2	481 aa	Known RBP	2.7	□□□□□ -1.98
RDX-215	ENST00000533961	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	2.7	□□□□□ -1.98
RDX-215	ENST00000533961	HEXA-AS1	Q9H8Q6	139 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	GPN1	Q9HCN4	374 aa	Predicted RBP	2.7	□□□□□ -1.98
RDX-215	ENST00000533961	ABCB8	Q9NUT2	735 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	RARRES3	Q9UL19	164 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	KLF2	Q9Y5W3	355 aa	Predicted RBP	2.7	□□□□□ -1.98
RDX-215	ENST00000533961	ADAMTS9	Q9P2N4	1935 aa		2.7	□□□□□ -1.98
RDX-215	ENST00000533961	RNF123	Q5XPI4	1314 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	TEX48	A0A1B0GUV7	120 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	IQCM	A0A1B0GVH7	501 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	OR5H15	A6NDH6	313 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961		M0R296	226 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	TNFSF12	O43508	249 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	SCO2	O43819	266 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	HOXD4	P09016	255 aa	Predicted RBP	2.69	□□□□□ -1.98
RDX-215	ENST00000533961	C8orf89	P0DMQ9	161 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	FOLR2	P14207	255 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	CPA3	P15088	417 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	BCL3	P20749	454 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	GPX3	P22352	226 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	OR3A3	P47888	321 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	RBBP4	Q09028	425 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	LCP2	Q13094	533 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	UPP1	Q16831	310 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	TYSND1	Q2T9J0	566 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	C3P1	Q6ZMU1	363 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	RFPL4B	Q6ZWI9	263 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	PHLDB2	Q86SQ0	1253 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	CARM1	Q86X55	608 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	IQCA1	Q86XH1	822 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	HPS6	Q86YV9	775 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	POM121L12	Q8N7R1	296 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	2.69	□□□□□ -1.98
RDX-215	ENST00000533961	CKAP2	Q8WWK9	683 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	MRPL24	Q96A35	216 aa	Known RBP	2.69	□□□□□ -1.98
RDX-215	ENST00000533961	MRPL53	Q96EL3	112 aa	Known RBP	2.69	□□□□□ -1.98
RDX-215	ENST00000533961	LURAP1	Q96LR2	239 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	RCHY1	Q96PM5	261 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	FUT8	Q9BYC5	575 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	JPT2	Q9H910	190 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	UBE2T	Q9NPD8	197 aa	Predicted RBP	2.69	□□□□□ -1.98
RDX-215	ENST00000533961	GPR173	Q9NS66	373 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	ZNF319	Q9P2F9	582 aa		2.69	□□□□□ -1.98
RDX-215	ENST00000533961	NIP7	Q9Y221	180 aa	Known RBP eCLIP	2.69	□□□□□ -1.98
RDX-215	ENST00000533961		A0A1W2PRV1	198 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	ZNF724	A8MTY0	619 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	SLC33A1	O00400	549 aa	Predicted RBP	2.68	□□□□□ -1.98
RDX-215	ENST00000533961	INPP4B	O15327	924 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	SYT7	O43581	403 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	FMO6P	O60774	539 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	DUSP11	O75319	330 aa	Known RBP	2.68	□□□□□ -1.98
RDX-215	ENST00000533961	PRDM1	O75626	825 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	GRAP2	O75791	330 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	AKAP3	O75969	853 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	SEMA4F	O95754	770 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	UROS	P10746	265 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	IL4R	P24394	825 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	PKLR	P30613	574 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	TRIM23	P36406	574 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	MTIF2	P46199	727 aa	Known RBP	2.68	□□□□□ -1.98
RDX-215	ENST00000533961	IER3	P46695	156 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	ASIC1	P78348	528 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	CYLC2	Q14093	348 aa	Predicted RBP	2.68	□□□□□ -1.98
RDX-215	ENST00000533961	SPHAR	Q15513	63 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	EIPR1	Q53HC9	387 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	TEX35	Q5T0J7	233 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	AGAP6	Q5VW22	663 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	OLFML2A	Q68BL7	652 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	CAPN13	Q6MZZ7	669 aa	Predicted RBP	2.68	□□□□□ -1.98
RDX-215	ENST00000533961	CDHR3	Q6ZTQ4	885 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	PRSS48	Q7RTY5	328 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	TMEM126B	Q8IUX1	230 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	CCDC71	Q8IV32	467 aa	Predicted RBP	2.68	□□□□□ -1.98
RDX-215	ENST00000533961	SERPINA12	Q8IW75	414 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	C4orf19	Q8IY42	314 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	CLYBL	Q8N0X4	340 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	NPRL2	Q8WTW4	380 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	PRCC	Q92733	491 aa	Predicted RBP	2.68	□□□□□ -1.98
RDX-215	ENST00000533961	GGH	Q92820	318 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	SPATA13	Q96N96	652 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	SLC5A7	Q9GZV3	580 aa		2.68	□□□□□ -1.98
RDX-215	ENST00000533961	ZNF350	Q9GZX5	532 aa		2.68	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms