RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 RPS27LQ71UM5 84 aaKnown RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 LCA5Q86VQ0 697 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 ZNF295-AS1Q8N0V1 137 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 RIBC1Q8N443 379 aaPredicted RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 ARHGEF39Q8N4T4 335 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 AMER2Q8N7J2 671 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 NT5CQ8TCD5 201 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 MZB1Q8WU39 189 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 UBE2E3Q969T4 207 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 NSUN5Q96P11 429 aaKnown RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 CDK15Q96Q40 435 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 TUBB6Q9BUF5 446 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 ROPN1BQ9BZX4 212 aaPredicted RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 EHD1Q9H4M9 534 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 KLHL31Q9H511 634 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 NOL11Q9H8H0 719 aaKnown RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 COPS7BQ9H9Q2 264 aaPredicted RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 ROPN1Q9HAT0 212 aaPredicted RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 SEMA4BQ9NPR2 832 aaPredicted RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 TINAGQ9UJW2 476 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 ITGB1BP2Q9UKP3 347 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 RAB21Q9UL25 225 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 MKL2Q9ULH7 1088 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 H0YIG0 161 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 PSMD12O00232 456 aaPredicted RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 SAP18O00422 153 aaKnown RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 ERI3O43414 337 aaKnown RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 KLK8O60259 260 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 DLX3O60479 287 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 SPAG7O75391 227 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 CLEC3AO75596 197 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 CDC123O75794 336 aaPredicted RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 CLDN9O95484 217 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 TGFB1P01137 390 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 SERPINA6P08185 405 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 C8orf89P0DMQ9 161 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 ESRRAP11474 423 aaPredicted RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 CD22P20273 847 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 ATP5F1P24539 256 aaPredicted RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 SSTR2P30874 369 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 HPDP32754 393 aaPredicted RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 XCR1P46094 333 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 SMSP52788 366 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 EFNA3P52797 238 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 CDH13P55290 713 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 BTN3A2P78410 334 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 PHEXP78562 749 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 PMP22Q01453 160 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 TGM3Q08188 693 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 TBCCQ15814 346 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 C3AR1Q16581 482 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 SGO1Q5FBB7 561 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 ZNF766Q5HY98 468 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 LIPJQ5W064 366 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 GRHL2Q6ISB3 625 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 TRIM40Q6P9F5 258 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 MILR1Q7Z6M3 343 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 PDSS2Q86YH6 399 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 ZC3H7AQ8IWR0 971 aaKnown RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 RNF175Q8N4F7 328 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 CCNYL1Q8N7R7 359 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 OR5T3Q8NGG3 340 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 OR51Q1Q8NH59 317 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 ADAMTS18Q8TE60 1221 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 UTP15Q8TED0 518 aaKnown RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 TRPC4APQ8TEL6 797 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 CREB3L4Q8TEY5 395 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 THAP3Q8WTV1 239 aaPredicted RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 METTL21AQ8WXB1 218 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 MTFMTQ96DP5 389 aaKnown RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 PEX11GQ96HA9 241 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 SARGQ9BW04 601 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 PITHD1Q9GZP4 211 aaPredicted RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 REXO4Q9GZR2 422 aaKnown RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 C12orf65Q9H3J6 166 aaKnown RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 NT5DC2Q9H857 520 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 PCTPQ9UKL6 214 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 GRID1Q9ULK0 1009 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 ZNF490Q9ULM2 529 aaPredicted RBP8.17□□□□□ -1.1
COPB1-210ENST00000533533 ZNF835Q9Y2P0 537 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 RNF11Q9Y3C5 154 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 PCDHGB6Q9Y5F9 930 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 SLC22A7Q9Y694 548 aa8.17□□□□□ -1.1
COPB1-210ENST00000533533 A0A088AWK7 358 aa8.16□□□□□ -1.1
COPB1-210ENST00000533533 LRIT2A6NDA9 550 aa8.16□□□□□ -1.1
COPB1-210ENST00000533533 A8MUI8 341 aa8.16□□□□□ -1.1
COPB1-210ENST00000533533 C19orf84I3L1E1 186 aa8.16□□□□□ -1.1
COPB1-210ENST00000533533 OR7A17O14581 309 aa8.16□□□□□ -1.1
COPB1-210ENST00000533533 RGS16O15492 202 aaPredicted RBP8.16□□□□□ -1.1
COPB1-210ENST00000533533 CHST10O43529 356 aa8.16□□□□□ -1.1
COPB1-210ENST00000533533 GALR3O60755 368 aaPredicted RBP8.16□□□□□ -1.1
COPB1-210ENST00000533533 B4GALT2O60909 372 aa8.16□□□□□ -1.1
COPB1-210ENST00000533533 SEC24DO94855 1032 aaPredicted RBP8.16□□□□□ -1.1
COPB1-210ENST00000533533 CLDN14O95500 239 aa8.16□□□□□ -1.1
COPB1-210ENST00000533533 SBK3P0C264 359 aa8.16□□□□□ -1.1
COPB1-210ENST00000533533 ZNF10P21506 573 aaPredicted RBP8.16□□□□□ -1.1
COPB1-210ENST00000533533 GSTM2P28161 218 aa8.16□□□□□ -1.1
COPB1-210ENST00000533533 HNRNPH1P31943 449 aaKnown RBP8.16□□□□□ -1.1
COPB1-210ENST00000533533 CASP2P42575 452 aa8.16□□□□□ -1.1
COPB1-210ENST00000533533 PRRC2AP48634 2157 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms