RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 HYKKA2RU49 373 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 A8MU76 341 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 CDX4O14627 284 aaPredicted RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 DNAJA2O60884 412 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 ANP32DO95626 131 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 CPSF4O95639 269 aaKnown RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 B3GALT4O96024 378 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 ACP1P24666 158 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 BUD31P41223 144 aaPredicted RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 ALDH9A1P49189 494 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 SLC7A2P52569 658 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 EEFSECP57772 596 aaKnown RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 TCF15Q12870 199 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 RUNX2Q13950 521 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 CEACAM7Q14002 265 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 SF3A2Q15428 464 aaKnown RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 DEFB110Q30KQ9 67 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 GLIPR1L2Q4G1C9 344 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 ZNF385BQ569K4 471 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 DGLUCYQ7Z3D6 616 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 ARHGAP22Q7Z5H3 698 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 HPS6Q86YV9 775 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 KIAA2013Q8IYS2 634 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 TTC29Q8NA56 475 aaPredicted RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 OR5P2Q8WZ92 322 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 TMEM125Q96AQ2 219 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 MIEF2Q96C03 454 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 PANX1Q96RD7 426 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 GFM1Q96RP9 751 aaKnown RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 MAPKAP1Q9BPZ7 522 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 SLC39A3Q9BRY0 314 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 INPP5KQ9BT40 448 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 SPRTNQ9H040 489 aaPredicted RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 ACSS1Q9NUB1 689 aaPredicted RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 CMTM6Q9NX76 183 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 TEX10Q9NXF1 929 aaPredicted RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 CES1P1Q9UKY3 287 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 ATXN7L1Q9ULK2 861 aaPredicted RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 DAPP1Q9UN19 280 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 MRPS2Q9Y399 296 aaKnown RBP11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 NAALAD2Q9Y3Q0 740 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 PCDHB14Q9Y5E9 798 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 SPACA6W5XKT8 324 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 WDR87Q6ZQQ6 2873 aa11.61□□□□□ -0.55
TGFBR3-211ENST00000533370 TP53BP1Q12888 1972 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 TRBV5-3A0A0A0MS03 114 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 IGHV5-10-1A0A0J9YXX1 117 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 NTN3O00634 580 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 PGRMC2O15173 223 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 OR2B3O76000 313 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 PDE5AO76074 875 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 CTSBP07858 339 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 CD59P13987 128 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 HSD17B1P14061 328 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 HOXB9P17482 250 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 CPN2P22792 545 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 PTPN6P29350 595 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 LIM2P55344 173 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 PCBP4P57723 403 aaKnown RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 TRAP1Q12931 704 aaKnown RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 TRA2AQ13595 282 aaKnown RBP eCLIP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 TRIM25Q14258 630 aaKnown RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 KCNAB1Q14722 419 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 MLC1Q15049 377 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 CSRP2Q16527 193 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 PRSS53Q2L4Q9 553 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 MPEG1Q2M385 716 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 MUM1Q2TAK8 710 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 YOD1Q5VVQ6 348 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 SLC48A1Q6P1K1 146 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 TLDC1Q6P9B6 456 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 BRICD5Q6PL45 260 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 ZNF621Q6ZSS3 439 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 ANKRD46Q86W74 232 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 PDSS2Q86YH6 399 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 MSRB3Q8IXL7 192 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 C10orf67Q8IYJ2 551 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 SAMD14Q8IZD0 417 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 MMP21Q8N119 569 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 TRIML2Q8N7C3 387 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 PRSS33Q8NF86 280 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 ZBED6CLQ96FA7 236 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 USB1Q9BQ65 265 aaKnown RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 THUMPD3Q9BV44 507 aaKnown RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 DENND2DQ9H6A0 471 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 FANCEQ9HB96 536 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 TMEM9BQ9NQ34 198 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 SLC35C2Q9NQQ7 365 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 IRAK4Q9NWZ3 460 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 SLC25A37Q9NYZ2 338 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 VAPAQ9P0L0 249 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 FTSJ1Q9UET6 329 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 BCAP29Q9UHQ4 241 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 VPS4AQ9UN37 437 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 POMPQ9Y244 141 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 GMEB1Q9Y692 573 aa11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 ARID1BQ8NFD5 2236 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-211ENST00000533370 PRORSD1PA6NEY8 169 aa11.59□□□□□ -0.55
TGFBR3-211ENST00000533370 EVPLLA8MZ36 301 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms