RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SLC17A6Q9P2U8 582 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 IKZF3Q9UKT9 509 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 CBLCQ9ULV8 474 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 PPIEQ9UNP9 301 aaKnown RBP12.05□□□□□ -0.48
COPB1-209ENST00000533096 MRPS33Q9Y291 106 aaKnown RBP12.05□□□□□ -0.48
COPB1-209ENST00000533096 VWA7Q9Y334 891 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 SCN2AQ99250 2005 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 SPG11Q96JI7 2443 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.04□□□□□ -0.48
COPB1-209ENST00000533096 LRIT2A6NDA9 550 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 TUBAL3A6NHL2 446 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 HSPB2A8KAH6 182 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 C17orf105B2RV13 164 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 FAM47E-STBD1D6RA91 191 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 CTNSO60931 367 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 RAF1P04049 648 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 INHBBP09529 407 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 RFPL3SP0C7P2 107 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 C1GALT1C1LP0DN25 315 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 GABRA1P14867 456 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 HNRNPH1P31943 449 aaKnown RBP12.04□□□□□ -0.48
COPB1-209ENST00000533096 GDF5P43026 501 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 MAGEA6P43360 314 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 KCNJ2P63252 427 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 RNF4P78317 190 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 POU4F3Q15319 338 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 ELAVL1Q15717 326 aaKnown RBP12.04□□□□□ -0.48
COPB1-209ENST00000533096 HSPB2Q16082 182 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 FLYWCH1Q4VC44 716 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 HP1BP3Q5SSJ5 553 aaPredicted RBP12.04□□□□□ -0.48
COPB1-209ENST00000533096 RIPPLY2Q5TAB7 128 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 SLC22A10Q63ZE4 541 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 TTC27Q6P3X3 843 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.04□□□□□ -0.48
COPB1-209ENST00000533096 ZNF595Q8IYB9 648 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 VWA5B2Q8N398 1253 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 LIX1Q8N485 282 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 MORN4Q8NDC4 146 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 TNIP2Q8NFZ5 429 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 OR5L2Q8NGL0 311 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 FAM222BQ8WU58 562 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 GAL3ST3Q96A11 431 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 MS4A6EQ96DS6 147 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 SGCZQ96LD1 299 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 CSF3RQ99062 836 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 NPLQ9BXD5 320 aaPredicted RBP12.04□□□□□ -0.48
COPB1-209ENST00000533096 RBSNQ9H1K0 784 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 SLC6A15Q9H2J7 730 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 LZTFL1Q9NQ48 299 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 CLDN16Q9Y5I7 305 aa12.04□□□□□ -0.48
COPB1-209ENST00000533096 ANKDD1BA6NHY2 528 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 KDM4EB2RXH2 506 aaPredicted RBP12.03□□□□□ -0.48
COPB1-209ENST00000533096 CDC7O00311 574 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 DVL2O14641 736 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 LDB3O75112 727 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 BANF1O75531 89 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 TRAPPC6AO75865 159 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 WDR47O94967 919 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 LRATO95237 230 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 TACR1P25103 407 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 CERS1P27544 350 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 LIM2P55344 173 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 SLBPQ14493 270 aaKnown RBP eCLIP12.03□□□□□ -0.48
COPB1-209ENST00000533096 PRAMEF20Q5VT98 475 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 ARMC3Q5W041 872 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 TMIGD1Q6UXZ0 262 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 SEM1Q6ZVN7 128 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 OR4N5Q8IXE1 308 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 FAM13CQ8NE31 585 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 GABPB2Q8TAK5 448 aaPredicted RBP12.03□□□□□ -0.48
COPB1-209ENST00000533096 RNASE6Q93091 150 aaKnown RBP12.03□□□□□ -0.48
COPB1-209ENST00000533096 PPWD1Q96BP3 646 aaKnown RBP12.03□□□□□ -0.48
COPB1-209ENST00000533096 COPS7BQ9H9Q2 264 aaPredicted RBP12.03□□□□□ -0.48
COPB1-209ENST00000533096 NEUROD4Q9HD90 331 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 B4GALT7Q9UBV7 327 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 VTI1BQ9UEU0 232 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 ATG4BQ9Y4P1 393 aa12.03□□□□□ -0.48
COPB1-209ENST00000533096 A0A088AWK7 358 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 C15orf38-AP3S2A0A0A6YYH1 394 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 CYR61O00622 381 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 CLGNO14967 610 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 HCN1O60741 890 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 SH3BGRLO75368 114 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 ATE1O95260 518 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 ETHE1O95571 254 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 PGAM1P18669 254 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 ENDOUP21128 410 aaKnown RBP12.02□□□□□ -0.49
COPB1-209ENST00000533096 ZNF10P21506 573 aaPredicted RBP12.02□□□□□ -0.49
COPB1-209ENST00000533096 NKX6-1P78426 367 aaPredicted RBP12.02□□□□□ -0.49
COPB1-209ENST00000533096 TRIM40Q6P9F5 258 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 ULK2Q8IYT8 1036 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 GOLM1Q8NBJ4 401 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 RELL2Q8NC24 303 aaPredicted RBP12.02□□□□□ -0.49
COPB1-209ENST00000533096 NAXEQ8NCW5 288 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 OR14A16Q8NHC5 309 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 SLC2A12Q8TD20 617 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 NUDT8Q8WV74 236 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 MBD6Q96DN6 1003 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 QRFPRQ96P65 431 aa12.02□□□□□ -0.49
COPB1-209ENST00000533096 F2RL3Q96RI0 385 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms