RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 OR2T11Q8NH01 316 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 PIWIL2Q8TC59 973 aaKnown RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 TUBGCP3Q96CW5 907 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 VPS50Q96JG6 964 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 C7orf26Q96N11 449 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 PTCHD1Q96NR3 888 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 IP6K3Q96PC2 410 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 RBCK1Q9BYM8 510 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 WDR41Q9HAD4 459 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 PRDM9Q9NQV7 894 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 PRTFDC1Q9NRG1 225 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 LANCL2Q9NS86 450 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 MARCOQ9UEW3 520 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 MCM8Q9UJA3 840 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 ATG4BQ9Y4P1 393 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 ASB4Q9Y574 426 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 PTGDR2Q9Y5Y4 395 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 SDK2Q58EX2 2172 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 MDC1Q14676 2089 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 ATP6AP2A0A1C7CYW4 349 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 A0A1W2PR48 441 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 CDC14CA4D256 554 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 OR2W5A6NFC9 320 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 TRPC5OSA6NMA1 111 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 K7ENP7 123 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 PEX12O00623 359 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 LSM1O15116 133 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 CTNSO60931 367 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 PEX11AO75192 247 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 ALOX12BO75342 701 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 VPS4BO75351 444 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 ATP6AP2O75787 350 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 UMODP07911 640 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 ANXA4P09525 319 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 TIA1P31483 386 aaKnown RBP eCLIP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 GSTM5P46439 218 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 HNRNPH2P55795 449 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 HSD17B7P56937 341 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 RAE1P78406 368 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 SLC13A2Q13183 592 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 KIAA0040Q15053 153 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 NSDHLQ15738 373 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 GALNTL6Q49A17 601 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 RFTN2Q52LD8 501 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 XKR7Q5GH72 579 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 NOXRED1Q6NXP6 359 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 INO80CQ6PI98 192 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 QSOX2Q6ZRP7 698 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 WDR75Q8IWA0 830 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 FAM47BQ8NA70 645 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 THAP4Q8WY91 577 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 TANKQ92844 425 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 TM4SF18Q96CE8 201 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 C11orf24Q96F05 449 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 PPP1R36Q96LQ0 422 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 C3orf30Q96M34 536 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 FAIM2Q9BWQ8 316 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 NUF2Q9BZD4 464 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 VN1R1Q9GZP7 353 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 NSRP1Q9H0G5 558 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 RPF2Q9H7B2 306 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 CPNE5Q9HCH3 593 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 SLCO1B3Q9NPD5 702 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 WBP11Q9Y2W2 641 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 TMED5Q9Y3A6 229 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 MMACHCQ9Y4U1 282 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 SPTBP11277 2137 aa10.58□□□□□ -0.72
TRAPPC4-211ENST00000533012 TCP11X1B4DZS4 312 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 JUNP05412 331 aaKnown RBP10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 C8orf89P0DMQ9 161 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 PRKAR1AP10644 381 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 DRD2P14416 443 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 MAPK1P28482 360 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 PPP2R1BP30154 601 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 RPL38P63173 70 aaKnown RBP10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 CXADRP78310 365 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 BTG2P78543 158 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 RHAGQ02094 409 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 GUCY1A3Q02108 690 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 TNFRSF17Q02223 184 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 ACTN3Q08043 901 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 STX4Q12846 297 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 BIKQ13323 160 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 IL10RAQ13651 578 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 ST3GAL2Q16842 350 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 SMU1Q2TAY7 513 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 C6orf136Q5SQH8 315 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 C18orf63Q68DL7 685 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 FAAH2Q6GMR7 532 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 TMEM205Q6UW68 189 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 FAM47EQ6ZV65 393 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 TMEM151BQ8IW70 566 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 PARP9Q8IXQ6 854 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 FNDC5Q8NAU1 212 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 BCAS4Q8TDM0 211 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 C16orf78Q8WTQ4 265 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 CATSPER2Q96P56 530 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 CSF3RQ99062 836 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 EPN3Q9H201 632 aa10.57□□□□□ -0.72
TRAPPC4-211ENST00000533012 AKTIPQ9H8T0 292 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms