RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 RNF175Q8N4F7 328 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 ZNF473Q8WTR7 871 aaKnown RBP17.68■□□□□ 0.42
SSH3-209ENST00000532600 FRMD6Q96NE9 622 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 ZIM3Q96PE6 472 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 SERINC2Q96SA4 455 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 MS4A8Q9BY19 250 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 TSPAN10Q9H1Z9 355 aaPredicted RBP17.68■□□□□ 0.42
SSH3-209ENST00000532600 PRTFDC1Q9NRG1 225 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 LRFN1Q9P244 771 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 DAPP1Q9UN19 280 aa17.68■□□□□ 0.42
SSH3-209ENST00000532600 MYOCOSA0A1B0GUC4 107 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 A0A1B0GUH1 482 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 B3GALT2O43825 422 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 ERLIN1O75477 346 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 SBK3P0C264 359 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 H2AFXP16104 143 aaPredicted RBP17.67■□□□□ 0.42
SSH3-209ENST00000532600 TRHRP34981 398 aaPredicted RBP17.67■□□□□ 0.42
SSH3-209ENST00000532600 HSD17B7P56937 341 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 OC90Q02509 493 aaPredicted RBP17.67■□□□□ 0.42
SSH3-209ENST00000532600 IRF8Q02556 426 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 ACAP2Q15057 778 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 SLC25A25Q6KCM7 469 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 TRIM40Q6P9F5 258 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 MYO7BQ6PIF6 2116 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.67■□□□□ 0.42
SSH3-209ENST00000532600 CLNKQ7Z7G1 428 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 LAS2Q8IYD9 372 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 TMEM151AQ8N4L1 468 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 B3GNT7Q8NFL0 401 aa17.67■□□□□ 0.42
SSH3-209ENST00000532600 ROPN1BQ9BZX4 212 aaPredicted RBP17.67■□□□□ 0.42
SSH3-209ENST00000532600 ROPN1Q9HAT0 212 aaPredicted RBP17.67■□□□□ 0.42
SSH3-209ENST00000532600 PNO1Q9NRX1 252 aaKnown RBP17.67■□□□□ 0.42
SSH3-209ENST00000532600 TRBV11-1A0A0K0K1C0 115 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 LRRC14BA6NHZ5 514 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 TMEM200CA6NKL6 621 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 SUPT3HB4E1H0 165 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 RTCAO00442 366 aaKnown RBP17.66■□□□□ 0.42
SSH3-209ENST00000532600 ZNHIT1O43257 154 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 NME2P1O60361 137 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 SUPT3HO75486 399 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 SLC25A12O75746 678 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 COL6A2P12110 1019 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 CD46P15529 392 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 NME2P22392 152 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 EEF1DP29692 281 aaKnown RBP17.66■□□□□ 0.42
SSH3-209ENST00000532600 MTTPP55157 894 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 TERF2Q15554 542 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 CHERPQ8IWX8 916 aaKnown RBP17.66■□□□□ 0.42
SSH3-209ENST00000532600 ARMC2Q8NEN0 867 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 RHEBL1Q8TAI7 183 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 ACMSDQ8TDX5 336 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 THAP3Q8WTV1 239 aaPredicted RBP17.66■□□□□ 0.42
SSH3-209ENST00000532600 NCLNQ969V3 563 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 GPR137Q96N19 417 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 DEFB126Q9BYW3 111 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 TMEM216Q9P0N5 145 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 CACNA1DQ01668 2161 aa17.66■□□□□ 0.42
SSH3-209ENST00000532600 K7EPI3 171 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 SH3BGRLO75368 114 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 S100BP04271 92 aaPredicted RBP17.65■□□□□ 0.42
SSH3-209ENST00000532600 KRT15P19012 456 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 CA7P43166 264 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 PER3P56645 1201 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 SLC13A2Q13183 592 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 LAPTM5Q13571 262 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 C16orf47Q6ZP98 133 aaPredicted RBP17.65■□□□□ 0.42
SSH3-209ENST00000532600 ZNF595Q8IYB9 648 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 RIBC1Q8N443 379 aaPredicted RBP17.65■□□□□ 0.42
SSH3-209ENST00000532600 CPSF7Q8N684 471 aaKnown RBP17.65■□□□□ 0.42
SSH3-209ENST00000532600 TMEM178AQ8NBL3 297 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 OR7G3Q8NG95 312 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 ITLN2Q8WWU7 325 aaPredicted RBP17.65■□□□□ 0.42
SSH3-209ENST00000532600 CCDC120Q96HB5 630 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 MAPKAP1Q9BPZ7 522 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 SORBS1Q9BX66 1292 aaKnown RBP17.65■□□□□ 0.42
SSH3-209ENST00000532600 XPR1Q9UBH6 696 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 EMCNQ9ULC0 261 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 ZNF835Q9Y2P0 537 aa17.65■□□□□ 0.42
SSH3-209ENST00000532600 TRGV8A0A0C4DH27 118 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 SAP18O00422 153 aaKnown RBP17.64■□□□□ 0.41
SSH3-209ENST00000532600 CDK2AP1O14519 115 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 KLK8O60259 260 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 CTNSO60931 367 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 TGFB1P01137 390 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 ATP5A1P25705 553 aaKnown RBP17.64■□□□□ 0.41
SSH3-209ENST00000532600 CYB561P49447 251 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 HLCSP50747 726 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 CLCN2P51788 898 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 SETDB1Q15047 1291 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 C3AR1Q16581 482 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 MAPKAPK3Q16644 382 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 KRT71Q3SY84 523 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 PAGE2BQ5JRK9 111 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 TRABD2AQ86V40 505 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 C4orf33Q8N1A6 199 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 ZNF321PQ8N8H1 164 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 ACOT4Q8N9L9 421 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 ADAMTS18Q8TE60 1221 aa17.64■□□□□ 0.41
SSH3-209ENST00000532600 PTPMT1Q8WUK0 201 aaPredicted RBP17.64■□□□□ 0.41
SSH3-209ENST00000532600 KCNC2Q96PR1 638 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms