RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ERI1Q8IV48 349 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 SULF2Q8IWU5 870 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 CHPFQ8IZ52 775 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 LILRA3Q8N6C8 439 aaPredicted RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 ZNF513Q8N8E2 541 aaPredicted RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 SRFBP1Q8NEF9 429 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 OR2L8Q8NGY9 312 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 C16orf78Q8WTQ4 265 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 RASSF5Q8WWW0 418 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 MYLIPQ8WY64 445 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 OR5P2Q8WZ92 322 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 RGMAQ96B86 450 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 SH3KBP1Q96B97 665 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 DTNBP1Q96EV8 351 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 MSANTD3Q96H12 275 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 ZFYVE19Q96K21 471 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 EGLN2Q96KS0 407 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 APOL4Q9BPW4 351 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 PSD2Q9BQI7 771 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 INPP5KQ9BT40 448 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 TBCDQ9BTW9 1192 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 SARGQ9BW04 601 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 EBPLQ9BY08 206 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 TRIM8Q9BZR9 551 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 PIF1Q9H611 641 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 C8orf33Q9H7E9 229 aaPredicted RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 SLC28A3Q9HAS3 691 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 CCNB1IP1Q9NPC3 277 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 MIEF1Q9NQG6 463 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 PRDM7Q9NQW5 492 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 THSD1Q9NS62 852 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 ACSS1Q9NUB1 689 aaPredicted RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 FAM118AQ9NWS6 357 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 TAS2R9Q9NYW1 312 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 LMCD1Q9NZU5 365 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 RSL24D1Q9UHA3 163 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 GPN3Q9UHW5 284 aaPredicted RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 FAF1Q9UNN5 650 aaPredicted RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 ANGPT4Q9Y264 503 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 SLC17A4Q9Y2C5 497 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 YBX2Q9Y2T7 364 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 COQ6Q9Y2Z9 468 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 PCDHGB3Q9Y5G1 929 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 PCDHGA2Q9Y5H1 932 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 DOCK8Q8NF50 2099 aa5.31□□□□□ -1.56
PCF11-205ENST00000530906 PRRC2BQ5JSZ5 2229 aaKnown RBP5.31□□□□□ -1.56
PCF11-205ENST00000530906 TRPM6Q9BX84 2022 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 A0A1W2PRB8 838 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 TRBC2A0A5B9 178 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 TMEM247A6NEH6 219 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 ARRDC5A6NEK1 342 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 M0QX08 132 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 TNFRSF10CO14798 259 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 VILLO15195 856 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 MID1O15344 667 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 JRKO75564 520 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 PDE9AO76083 593 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 ETHE1O95571 254 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 CPSF4O95639 269 aaKnown RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 ZNF682O95780 498 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 C9P02748 559 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 DNTTP04053 509 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 PCCBP05166 539 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 GSNP06396 782 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 GLULP15104 373 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 MYOGP15173 224 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 DDCP20711 480 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 DRD1P21728 446 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 UQCRC2P22695 453 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 IGFBP5P24593 272 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 PKLRP30613 574 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 GDI1P31150 447 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 AHRP35869 848 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 NUDT1P36639 197 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 FRKP42685 505 aaPredicted RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 CDKN2CP42773 168 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 KIR2DL1P43626 348 aaPredicted RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 PXNP49023 591 aaPredicted RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 PRIM2P49643 509 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 METAP1P53582 386 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 MAPK12P53778 367 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 TPD52P55327 224 aaPredicted RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 TAS2R38P59533 333 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 MRPS21P82921 87 aaKnown RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 PLIN5Q00G26 463 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 MVKQ03426 396 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 RELAQ04206 551 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 PRDX1Q06830 199 aaKnown RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 TGM3Q08188 693 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 C2orf80Q0P641 193 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 GRSF1Q12849 480 aaKnown RBP eCLIP5.3□□□□□ -1.56
PCF11-205ENST00000530906 GNA13Q14344 377 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 IRF4Q15306 451 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 NKG7Q16617 165 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 HKDC1Q2TB90 917 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 UAP1L1Q3KQV9 507 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 FBXO43Q4G163 708 aa5.3□□□□□ -1.56
PCF11-205ENST00000530906 LRRC23Q53EV4 343 aaPredicted RBP5.3□□□□□ -1.56
PCF11-205ENST00000530906 PYCR3Q53H96 274 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms