RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 CLCA3PQ9Y6N3 262 aa9.64□□□□□ -0.87
COPB1-207ENST00000529866 RTTNQ86VV8 2226 aa9.64□□□□□ -0.87
COPB1-207ENST00000529866 A0A088AWK7 358 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 AHRRA9YTQ3 701 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 EEF1E1-BLOC1S5C9J1V9 151 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 INAFM1C9JVW0 142 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 EEF1E1O43324 174 aaKnown RBP9.63□□□□□ -0.87
COPB1-207ENST00000529866 PRKNO60260 465 aaPredicted RBP9.63□□□□□ -0.87
COPB1-207ENST00000529866 SMPD2O60906 423 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 BANF1O75531 89 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 IFNA16P05015 189 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 NPPBP16860 134 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 ENDOUP21128 410 aaKnown RBP9.63□□□□□ -0.87
COPB1-207ENST00000529866 ZNF10P21506 573 aaPredicted RBP9.63□□□□□ -0.87
COPB1-207ENST00000529866 TIMP3P35625 211 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 SLC1A2P43004 574 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 MAGEA3P43357 314 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 HK2P52789 917 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 TBL3Q12788 808 aaKnown RBP9.63□□□□□ -0.87
COPB1-207ENST00000529866 DHX34Q14147 1143 aaKnown RBP9.63□□□□□ -0.87
COPB1-207ENST00000529866 CSHL1Q14406 222 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 CYP1B1Q16678 543 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 ACSF3Q4G176 576 aaPredicted RBP9.63□□□□□ -0.87
COPB1-207ENST00000529866 UGT3A1Q6NUS8 523 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 CASC4Q6P4E1 433 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 MBOAT1Q6ZNC8 495 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 CAPN12Q6ZSI9 719 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 CA13Q8N1Q1 262 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 MYO1HQ8N1T3 1032 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 NAXEQ8NCW5 288 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 OR4K1Q8NGD4 311 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 OR5L2Q8NGL0 311 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 OR8K3Q8NH51 312 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 NEIL3Q8TAT5 605 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 LINC01560Q8TB33 94 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 MAIP1Q8WWC4 291 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 ZNF592Q92610 1267 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 SNF8Q96H20 258 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 FAR2Q96K12 515 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 ZNF703Q9H7S9 590 aaPredicted RBP9.63□□□□□ -0.87
COPB1-207ENST00000529866 TUBA8Q9NY65 449 aaPredicted RBP9.63□□□□□ -0.87
COPB1-207ENST00000529866 SPRR3Q9UBC9 169 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 ATG4BQ9Y4P1 393 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 MAD1L1Q9Y6D9 718 aa9.63□□□□□ -0.87
COPB1-207ENST00000529866 ARID1AO14497 2285 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 SMAD7O15105 426 aaKnown RBP9.62□□□□□ -0.87
COPB1-207ENST00000529866 NRDCO43847 1150 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 EPPINO95925 133 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 HRGP04196 525 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 SERPINA6P08185 405 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 CCL3P10147 92 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 BMP7P18075 431 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 PPP2R1BP30154 601 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 CEACAM8P31997 349 aaPredicted RBP9.62□□□□□ -0.87
COPB1-207ENST00000529866 STXBP1P61764 594 aaKnown RBP9.62□□□□□ -0.87
COPB1-207ENST00000529866 KCNJ2P63252 427 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 SARNPP82979 210 aaKnown RBP9.62□□□□□ -0.87
COPB1-207ENST00000529866 REEP5Q00765 189 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 TIAL1Q01085 375 aaKnown RBP eCLIP9.62□□□□□ -0.87
COPB1-207ENST00000529866 DHX9Q08211 1270 aaKnown RBP9.62□□□□□ -0.87
COPB1-207ENST00000529866 RCN2Q14257 317 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 POU4F3Q15319 338 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 DUPD1Q68J44 220 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 PRSS57Q6UWY2 283 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 SEM1Q6ZVN7 128 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 CXorf67Q86X51 503 aaPredicted RBP9.62□□□□□ -0.87
COPB1-207ENST00000529866 NAT8LQ8N9F0 302 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 MORN4Q8NDC4 146 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 OR14A16Q8NHC5 309 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 CALML6Q8TD86 181 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 SLC5A11Q8WWX8 675 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 ATL1Q8WXF7 558 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 SMPDL3BQ92485 455 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 PIGTQ969N2 578 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 MAGOHBQ96A72 148 aaKnown RBP9.62□□□□□ -0.87
COPB1-207ENST00000529866 CAPZA3Q96KX2 299 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 SIGLEC10Q96LC7 697 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 Q96MF0 132 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 DACH2Q96NX9 599 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 SECISBP2Q96T21 854 aaKnown RBP9.62□□□□□ -0.87
COPB1-207ENST00000529866 PIP5K1AQ99755 562 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 AIF1LQ9BQI0 150 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 NPLQ9BXD5 320 aaPredicted RBP9.62□□□□□ -0.87
COPB1-207ENST00000529866 ZFP64Q9NPA5 681 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 ACKR4Q9NPB9 350 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 QPCTLQ9NXS2 382 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 ARL15Q9NXU5 204 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 SLC17A6Q9P2U8 582 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 ADAMTS6Q9UKP5 1117 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 EIF3LQ9Y262 564 aaKnown RBP9.62□□□□□ -0.87
COPB1-207ENST00000529866 MXRA5Q9NR99 2828 aa9.62□□□□□ -0.87
COPB1-207ENST00000529866 SONP18583 2426 aaKnown RBP9.62□□□□□ -0.87
COPB1-207ENST00000529866 FBN1P35555 2871 aaKnown RBP9.61□□□□□ -0.87
COPB1-207ENST00000529866 SCN3AQ9NY46 2000 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 C15orf38-AP3S2A0A0A6YYH1 394 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 CASKO14936 926 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 B3GALT2O43825 422 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 SAT1P21673 171 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 OPRM1P35372 400 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 PIGAP37287 484 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms