RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 MRPL46Q9H2W6 279 aaKnown RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 ADAP2Q9NPF8 381 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 SEMA4BQ9NPR2 832 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 PFDN4Q9NQP4 134 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 ZNF358Q9NW07 568 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 PSMC3IPQ9P2W1 217 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 SUCOQ9UBS9 1254 aaKnown RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 SEC14L3Q9UDX4 400 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 PHF11Q9UIL8 331 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 ZNF490Q9ULM2 529 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-210ENST00000528441 DAPP1Q9UN19 280 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 SLC5A6Q9Y289 635 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 NTNG1Q9Y2I2 539 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 NBASA2RRP1 2371 aa8.5□□□□□ -1.05
CMTM1-210ENST00000528441 SHANK1Q9Y566 2161 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 CPAMD8Q8IZJ3 1885 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 A0A1W2PQ72 361 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 TCRBV16S1A1N1A0A5B0 115 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 A8MVJ9 347 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 C17orf105B2RV13 164 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 GOLGA8RI6L899 631 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 RIPK2O43353 540 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 CDC40O60508 579 aaKnown RBP eCLIP8.49□□□□□ -1.05
CMTM1-210ENST00000528441 SEMA7AO75326 666 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 SLC25A12O75746 678 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 ZFAND5O76080 213 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 SUPT7LO94864 414 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 UNC5CO95185 931 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 ESRRBO95718 433 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 SMIM10L1P0DMW3 83 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 ESRRAP11474 423 aaPredicted RBP8.49□□□□□ -1.05
CMTM1-210ENST00000528441 COL6A2P12110 1019 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 KRT15P19012 456 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 TSPAN8P19075 237 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 HIST1H1TP22492 207 aaPredicted RBP8.49□□□□□ -1.05
CMTM1-210ENST00000528441 ATP5A1P25705 553 aaKnown RBP8.49□□□□□ -1.05
CMTM1-210ENST00000528441 TPP2P29144 1249 aaPredicted RBP8.49□□□□□ -1.05
CMTM1-210ENST00000528441 PPP2R1BP30154 601 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 HMOX2P30519 316 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 SSR4P51571 173 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 KCNK10P57789 538 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 PLIN5Q00G26 463 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 PLGLB1Q02325 96 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 PCBP2Q15366 365 aaKnown RBP eCLIP8.49□□□□□ -1.059e-7■■■■□ 24.1
CMTM1-210ENST00000528441 ZRSR2Q15696 482 aaKnown RBP8.49□□□□□ -1.05
CMTM1-210ENST00000528441 SPINK14Q6IE38 97 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 OR4C11Q6IEV9 310 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 SLC25A25Q6KCM7 469 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 RPUSD3Q6P087 351 aaKnown RBP8.49□□□□□ -1.05
CMTM1-210ENST00000528441 BRICD5Q6PL45 260 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 GALNTL5Q7Z4T8 443 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 VN1R5Q7Z5H4 357 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 FJX1Q86VR8 437 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 NUDT13Q86X67 352 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 RELL1Q8IUW5 271 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 OR4N5Q8IXE1 308 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 CYP4Z2PQ8N1L4 340 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 DCAKDQ8WVC6 231 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 SELENOMQ8WWX9 145 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 NR4A3Q92570 626 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 MTBPQ96DY7 904 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 WDR34Q96EX3 536 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 SMIM10Q96HG1 83 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 MAPKAP1Q9BPZ7 522 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 MRPL57Q9BQC6 102 aaKnown RBP8.49□□□□□ -1.05
CMTM1-210ENST00000528441 CNPPD1Q9BV87 410 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 HES7Q9BYE0 225 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 ALOXE3Q9BYJ1 711 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 RNF32Q9H0A6 362 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 TSPAN10Q9H1Z9 355 aaPredicted RBP8.49□□□□□ -1.05
CMTM1-210ENST00000528441 LYRM4Q9HD34 91 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 DMRT3Q9NQL9 472 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 HPF1Q9NWY4 346 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 MS4A12Q9NXJ0 267 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 AHSPQ9NZD4 102 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 ZNF180Q9UJW8 692 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 SLC12A4Q9UP95 1085 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 RNF11Q9Y3C5 154 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 SVILO95425 2214 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 HELZ2Q9BYK8 2649 aaKnown RBP8.49□□□□□ -1.05
CMTM1-210ENST00000528441 DOPEY2Q9Y3R5 2298 aa8.49□□□□□ -1.05
CMTM1-210ENST00000528441 CFAP46Q8IYW2 2715 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 NPIPA5E9PKD4 350 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 STX16-NPEPL1H3BU86 382 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 STX16O14662 325 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 TFECO14948 347 aaPredicted RBP8.48□□□□□ -1.05
CMTM1-210ENST00000528441 LRRTM2O43300 516 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 CTIFO43310 598 aaKnown RBP8.48□□□□□ -1.05
CMTM1-210ENST00000528441 UGDHO60701 494 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 PRAMEF4O60810 478 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 CTNSO60931 367 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 CBX6O95503 412 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 OTCP00480 354 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 ABHD2P08910 425 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 NR2F6P10588 404 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 MTHFD2P13995 350 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 ABOP16442 354 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 ZNF24P17028 368 aa8.48□□□□□ -1.05
CMTM1-210ENST00000528441 PTX3P26022 381 aaPredicted RBP8.48□□□□□ -1.05
CMTM1-210ENST00000528441 CD96P40200 585 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms