RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 NDOR1Q9UHB4 597 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 ZFP69BQ9UJL9 534 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 ZNF835Q9Y2P0 537 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 MEMO1Q9Y316 297 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 TSC22D4Q9Y3Q8 395 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 AP1M2Q9Y6Q5 423 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 SCN2AQ99250 2005 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 PABPN1LA6NDY0 278 aaKnown RBP10.27□□□□□ -0.77
NEDD8-204ENST00000526430 H0YIV9 168 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 SOCS6O14544 535 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 CLGNO14967 610 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 BIRC5O15392 142 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 ATP8B1O43520 1251 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 FOXS1O43638 330 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 UGDHO60701 494 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 OR4F21O95013 312 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 ZWINTO95229 277 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 ONECUT2O95948 504 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 CHRNGP07510 517 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 AHRP35869 848 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 PIK3CGP48736 1102 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 RPS15AP62244 130 aaKnown RBP10.27□□□□□ -0.77
NEDD8-204ENST00000526430 DCDP81605 110 aaKnown RBP10.27□□□□□ -0.77
NEDD8-204ENST00000526430 SLBPQ14493 270 aaKnown RBP eCLIP10.27□□□□□ -0.77
NEDD8-204ENST00000526430 ADPRMQ3LIE5 342 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 LIPJQ5W064 366 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 GRHL2Q6ISB3 625 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 TMIGD1Q6UXZ0 262 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 ZCCHC23Q6ZST2 131 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 FRMD7Q6ZUT3 714 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 ADCK2Q7Z695 626 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 UBE3DQ7Z6J8 389 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.27□□□□□ -0.77
NEDD8-204ENST00000526430 AFAP1L2Q8N4X5 818 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 ZNF655Q8N720 491 aaPredicted RBP10.27□□□□□ -0.77
NEDD8-204ENST00000526430 OR7G3Q8NG95 312 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 AGAP11Q8TF27 550 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 ZNF473Q8WTR7 871 aaKnown RBP10.27□□□□□ -0.77
NEDD8-204ENST00000526430 CCDC126Q96EE4 140 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 THAP11Q96EK4 314 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 C10orf90Q96M02 699 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 ALPK1Q96QP1 1244 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 SELENOSQ9BQE4 189 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 SLC6A16Q9GZN6 736 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 KCNK9Q9NPC2 374 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 FARSBQ9NSD9 589 aaKnown RBP10.27□□□□□ -0.77
NEDD8-204ENST00000526430 CCM2LQ9NUG4 571 aaPredicted RBP10.27□□□□□ -0.77
NEDD8-204ENST00000526430 TINAGQ9UJW2 476 aa10.27□□□□□ -0.77
NEDD8-204ENST00000526430 RUVBL1Q9Y265 456 aaKnown RBP10.27□□□□□ -0.77
NEDD8-204ENST00000526430 SCN3AQ9NY46 2000 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 DYTNA2CJ06 578 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 WDR91A4D1P6 747 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 DYNC1I1O14576 645 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 MAP3K7O43318 606 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 ALOX12BO75342 701 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 OR2B3O76000 313 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 KLHL18O94889 574 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 CLDN9O95484 217 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 ETHE1O95571 254 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 B3GALT4O96024 378 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 HNRNPH1P31943 449 aaKnown RBP10.26□□□□□ -0.77
NEDD8-204ENST00000526430 HNF4AP41235 474 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 NEK2P51955 445 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 EMP3P54852 163 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 ADAM8P78325 824 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 ARG2P78540 354 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 NAA25Q14CX7 972 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 UGT3A2Q3SY77 523 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 GGTA1PQ4G0N0 100 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 ARL13AQ5H913 290 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-204ENST00000526430 TCHHL1Q5QJ38 904 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-204ENST00000526430 TMEM214Q6NUQ4 689 aaKnown RBP10.26□□□□□ -0.77
NEDD8-204ENST00000526430 LINC00696Q6ZRV3 163 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 PRSS41Q7RTY9 318 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 MILR1Q7Z6M3 343 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 ASPGQ86U10 573 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 TMEM200AQ86VY9 491 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 PDSS2Q86YH6 399 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 NUDCD3Q8IVD9 361 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 GPR135Q8IZ08 494 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 CCNYL1Q8N7R7 359 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 CCDC63Q8NA47 563 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 NT5CQ8TCD5 201 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-204ENST00000526430 SLC13A3Q8WWT9 602 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 NRGNQ92686 78 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 HAS2Q92819 552 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 THOC3Q96J01 351 aaKnown RBP10.26□□□□□ -0.77
NEDD8-204ENST00000526430 VPS50Q96JG6 964 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 KCNA7Q96RP8 456 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 ZNF382Q96SR6 550 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 SORT1Q99523 831 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 AIF1LQ9BQI0 150 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 EFCAB11Q9BUY7 163 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 PITHD1Q9GZP4 211 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-204ENST00000526430 STMN4Q9H169 189 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-204ENST00000526430 DHCR7Q9UBM7 475 aaKnown RBP10.26□□□□□ -0.77
NEDD8-204ENST00000526430 KCNN3Q9UGI6 736 aa10.26□□□□□ -0.77
NEDD8-204ENST00000526430 HYKKA2RU49 373 aa10.25□□□□□ -0.77
NEDD8-204ENST00000526430 LRIT2A6NDA9 550 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms