RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 NADKO95544 446 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-201ENST00000526271 ENO2P09104 434 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-201ENST00000526271 RFPL3SP0C7P2 107 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 ACVR2AP27037 513 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 GMPRP36959 345 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 HSD17B7P56937 341 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 CKAP4Q07065 602 aaKnown RBP13.2□□□□□ -0.3
CPSF1-201ENST00000526271 PDAP1Q13442 181 aaKnown RBP13.2□□□□□ -0.3
CPSF1-201ENST00000526271 SLBPQ14493 270 aaKnown RBP eCLIP13.2□□□□□ -0.3
CPSF1-201ENST00000526271 HYAL4Q2M3T9 481 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 STEAP4Q687X5 459 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 NIPAL1Q6NVV3 410 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 POMZP3Q6PJE2 187 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 TGIF2LYQ8IUE0 185 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 PALM2Q8IXS6 379 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 EID3Q8N140 333 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 RELL2Q8NC24 303 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-201ENST00000526271 NAXEQ8NCW5 288 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 TRPV3Q8NET8 790 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 ESAMQ96AP7 390 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 FOXC2Q99958 501 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 L2HGDHQ9H9P8 463 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 ADAP2Q9NPF8 381 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 DAPP1Q9UN19 280 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 RPH3AQ9Y2J0 694 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-201ENST00000526271 ZANQ9Y493 2812 aa13.2□□□□□ -0.3
CPSF1-201ENST00000526271 DOCK7Q96N67 2140 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 LRRC3CA6NJW4 275 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 A8MVJ9 347 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 FOXO6A8MYZ6 492 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 PSMD12O00232 456 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-201ENST00000526271 DNALI1O14645 258 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-201ENST00000526271 PIAS1O75925 651 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 C1GALT1C1LP0DN25 315 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 CD99P14209 185 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 PLA2G16P53816 162 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 WNT3P56703 355 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 TAS2R39P59534 338 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 ID2Q02363 134 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 FOXD4Q12950 439 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-201ENST00000526271 TSNQ15631 228 aaKnown RBP13.19□□□□□ -0.3
CPSF1-201ENST00000526271 ZNF585AQ6P3V2 769 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 ABHD17CQ6PCB6 329 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 ZZZ3Q8IYH5 903 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 OR5M3Q8NGP4 307 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 ZNF721Q8TF20 911 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 ATL1Q8WXF7 558 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 ASB15Q8WXK1 588 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 ANKRD9Q96BM1 317 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-201ENST00000526271 RHBDF1Q96CC6 855 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 RUNDC3BQ96NL0 473 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 NPLQ9BXD5 320 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-201ENST00000526271 DDX47Q9H0S4 455 aaKnown RBP13.19□□□□□ -0.3
CPSF1-201ENST00000526271 SMYD2Q9NRG4 433 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 HPF1Q9NWY4 346 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 VTI1BQ9UEU0 232 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 ERVK-11Q9UQG0 969 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 DYRK1BQ9Y463 629 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 ATG4BQ9Y4P1 393 aa13.19□□□□□ -0.3
CPSF1-201ENST00000526271 AQP7O14520 342 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 PROM1O43490 865 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 LDB3O75112 727 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 KLK2P20151 261 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 CNR1P21554 472 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 PIGAP37287 484 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 ELK3P41970 407 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 ZFP36L2P47974 494 aaKnown RBP13.18□□□□□ -0.3
CPSF1-201ENST00000526271 SKP1P63208 163 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 RNF4P78317 190 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 CDKL1Q00532 357 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 PLGLB1Q02325 96 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 SLC13A2Q13183 592 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 MYBPHQ13203 477 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 ELAVL1Q15717 326 aaKnown RBP13.18□□□□□ -0.3
CPSF1-201ENST00000526271 BBS9Q3SYG4 887 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 FAM45BPQ6NSW5 357 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 TMIGD1Q6UXZ0 262 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 ACAD11Q709F0 780 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 ZC3HC1Q86WB0 502 aaKnown RBP13.18□□□□□ -0.3
CPSF1-201ENST00000526271 KRTAP1-3Q8IUG1 177 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 FAM45AQ8TCE6 357 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 DOK4Q8TEW6 326 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 GRK7Q8WTQ7 553 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 MAPKAP1Q9BPZ7 522 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 GPATCH1Q9BRR8 931 aaKnown RBP13.18□□□□□ -0.3
CPSF1-201ENST00000526271 IL1RL2Q9HB29 575 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 DNAJB12Q9NXW2 375 aaKnown RBP13.18□□□□□ -0.3
CPSF1-201ENST00000526271 ST6GALNAC2Q9UJ37 374 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 CHMP2BQ9UQN3 213 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 OARD1Q9Y530 152 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 TEX264Q9Y6I9 313 aa13.18□□□□□ -0.3
CPSF1-201ENST00000526271 TLN2Q9Y4G6 2542 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 ATP6AP2A0A1C7CYW4 349 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 OR14I1A6ND48 311 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 URADA6NGE7 173 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 RTCAO00442 366 aaKnown RBP13.17□□□□□ -0.3
CPSF1-201ENST00000526271 CLDN4O14493 209 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 CTNSO60931 367 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 CLEC3AO75596 197 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 ATP6AP2O75787 350 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms