RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 GNG14A0A1W2PPG7 69 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 TCRBV16S1A1N1A0A5B0 115 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 DYTNA2CJ06 578 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SAGE2PA6NJ88 616 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 FAM227AF5H4B4 570 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC28A1O00337 649 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 AZIN1O14977 448 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 BIRC5O15392 142 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 RGS14O43566 566 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 PCDH7O60245 1069 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 CTNSO60931 367 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 CEACAM4O75871 244 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 HSPA4LO95757 839 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SERPINE1P05121 402 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 KLK1P06870 262 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 BPGMP07738 259 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 PRR35P0CG20 571 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 DDX5P17844 614 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 GRK2P25098 689 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 ALDH3A1P30838 453 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 GSTM5P46439 218 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SERPINB4P48594 390 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SOX8P57073 446 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SNRPNP63162 240 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 ARG2P78540 354 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 BTG2P78543 158 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 PCOLCEQ15113 449 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 ELAVL1Q15717 326 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SOWAHCQ53LP3 525 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR52E8Q6IFG1 317 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 ISLR2Q6UXK2 745 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF793Q6ZN11 406 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 ATG14Q6ZNE5 492 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 COMMD6Q7Z4G1 85 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 UBE3DQ7Z6J8 389 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 CLNKQ7Z7G1 428 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 CUZD1Q86UP6 607 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 TRIM42Q8IWZ5 723 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 DDIASQ8IXT1 998 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 METTL4Q8N3J2 472 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMEM132CQ8N3T6 1108 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 RNF175Q8N4F7 328 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 C1orf52Q8N6N3 182 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 ANKRD42Q8N9B4 389 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 M1APQ8TC57 530 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 DAZLQ92904 295 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 ART5Q96L15 291 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF354BQ96LW1 612 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 DGAT2Q96PD7 388 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 HBEGFQ99075 208 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SMAD5Q99717 465 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 PAIP2Q9BPZ3 127 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 MAPKAP1Q9BPZ7 522 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 MECRQ9BV79 373 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 NUDT9Q9BW91 350 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SORBS1Q9BX66 1292 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 MRPL1Q9BYD6 325 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SHCBP1LQ9BZQ2 653 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 AICDAQ9GZX7 198 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 ILKAPQ9H0C8 392 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 C12orf65Q9H3J6 166 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 DDX31Q9H8H2 851 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 MMP25Q9NPA2 562 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLAMF7Q9NQ25 335 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 PNO1Q9NRX1 252 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 FARSBQ9NSD9 589 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 GIMAP4Q9NUV9 329 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 PTGFRNQ9P2B2 879 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 RALYQ9UKM9 306 aaKnown RBP5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 PSME2Q9UL46 239 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 FIS1Q9Y3D6 152 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 TIMM22Q9Y584 194 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 FREM2Q5SZK8 3169 aa5.07□□□□□ -1.6
HMGB1P40-201ENST00000525121 CACNA1BQ00975 2339 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 IGKV3D-11A0A0A0MRZ8 115 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 IGHV3-20A0A0C4DH32 117 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 TRBV11-1A0A0K0K1C0 115 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMEM120BA0PK00 339 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 C1orf226A1L170 272 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 WDR91A4D1P6 747 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR2W5A6NFC9 320 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 A8MUA0 341 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 A8MUI8 341 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMEM114B3SHH9 223 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 B8ZZF3 427 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 CYR61O00622 381 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 PPP6CO00743 305 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 FCHO1O14526 889 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 UBFD1O14562 309 aaKnown RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC28A2O43868 658 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 TYROBPO43914 113 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 LDB3O75112 727 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 EEDO75530 441 aaKnown RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 RSL1D1O76021 490 aaKnown RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ETHE1O95571 254 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 AIFM1O95831 613 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 TBX6O95947 436 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 GBAP04062 536 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ALOX15P16050 662 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms