RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 A0A0G2JN53 185 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 ZCWPW2A0A1B0GU75 182 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 MYOCOSA0A1B0GUC4 107 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 CTAGE15A4D2H0 777 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 SYNDIG1LA6NDD5 238 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 C4orf51C9J302 202 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 TGFBR3LH3BV60 316 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 ARHGEF9O43307 516 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 B3GALT2O43825 422 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 NRDCO43847 1150 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 LY6G6DO95868 133 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 CCL3P10147 92 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 PTMSP20962 102 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 ZNF10P21506 573 aaPredicted RBP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 PIGAP37287 484 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 VPS41P49754 854 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 HNRNPFP52597 415 aaKnown RBP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 AP1S2P56377 157 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 DCAF7P61962 342 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 RNF4P78317 190 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 CCZ1BP86790 482 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 CCZ1P86791 482 aaPredicted RBP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 REEP5Q00765 189 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 FOXO1Q12778 655 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 GPS1Q13098 491 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 RUNX2Q13950 521 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 PCBP2Q15366 365 aaKnown RBP eCLIP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 SIX1Q15475 284 aaPredicted RBP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 KCTD19Q17RG1 926 aaPredicted RBP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 HSP90AA5PQ58FG0 334 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 SLC22A10Q63ZE4 541 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 NXPE4Q6UWF7 544 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 MAATS1Q7Z4T9 603 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 CLNKQ7Z7G1 428 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 TMPRSS11BQ86T26 416 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 CTAGE6Q86UF2 777 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 CAND1Q86VP6 1230 aaKnown RBP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 PRIMA1Q86XR5 153 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 ZNF595Q8IYB9 648 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 ULK2Q8IYT8 1036 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 LIX1Q8N485 282 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 FAM47BQ8NA70 645 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 RELL2Q8NC24 303 aaPredicted RBP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 MORN4Q8NDC4 146 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 TMEM52Q8NDY8 209 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 LINC01560Q8TB33 94 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 MAIP1Q8WWC4 291 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 CCT6BQ92526 530 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 FBXL8Q96CD0 374 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 LINGO1Q96FE5 620 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 SH3GL2Q99962 352 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 YIPF4Q9BSR8 244 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 ALOXE3Q9BYJ1 711 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 OR8D2Q9GZM6 311 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 PLEKHF2Q9H8W4 249 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 PELI2Q9HAT8 420 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 SEMA4BQ9NPR2 832 aaPredicted RBP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 IARS2Q9NSE4 1012 aaKnown RBP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 BEX4Q9NWD9 120 aaPredicted RBP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 SPRR3Q9UBC9 169 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 ZNF629Q9UEG4 869 aaPredicted RBP7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 ZKSCAN5Q9Y2L8 839 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 ATG4BQ9Y4P1 393 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 PCDHGB3Q9Y5G1 929 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 CAPN6Q9Y6Q1 641 aa7.33□□□□□ -1.24
NSMCE2-213ENST00000523824 COL6A5A8TX70 2615 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 AHRRA9YTQ3 701 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 GOLGA8MH3BSY2 632 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 ERI3O43414 337 aaKnown RBP7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 CTNSO60931 367 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 H2AFYO75367 372 aaKnown RBP7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 EPPINO95925 133 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 IL2RAP01589 272 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 MLNP12872 115 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 ENDOUP21128 410 aaKnown RBP7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 PCSK6P29122 969 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 CEACAM8P31997 349 aaPredicted RBP7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 TRPC1P48995 793 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 CDKN2DP55273 166 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 RAB38P57729 211 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 IL2P60568 153 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 KCNJ2P63252 427 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 TIAL1Q01085 375 aaKnown RBP eCLIP7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 STX4Q12846 297 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 RCN2Q14257 317 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 FBXL19-AS1Q494R0 122 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 ANKRD22Q5VYY1 191 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 SEM1Q6ZVN7 128 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 THOC6Q86W42 341 aaKnown RBP7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 P3H2Q8IVL5 708 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 RNF10Q8N5U6 811 aaKnown RBP7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 ZNF321PQ8N8H1 164 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 NAXEQ8NCW5 288 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 TNIP2Q8NFZ5 429 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 OR8K3Q8NH51 312 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 OR14A16Q8NHC5 309 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 NEIL3Q8TAT5 605 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 PTPMT1Q8WUK0 201 aaPredicted RBP7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 GAL3ST3Q96A11 431 aa7.32□□□□□ -1.24
NSMCE2-213ENST00000523824 JSRP1Q96MG2 331 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms