RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ZNF595Q8IYB9 648 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 TMEM132CQ8N3T6 1108 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 TTLQ8NG68 377 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 OR10Q1Q8NGQ4 319 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 PTPMT1Q8WUK0 201 aaPredicted RBP14.31□□□□□ -0.12
MRPS28-209ENST00000522987 RND1Q92730 232 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 LRRC39Q96DD0 335 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 SCYL1Q96KG9 808 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 RUNDC3BQ96NL0 473 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 SERINC2Q96SA4 455 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 SORBS1Q9BX66 1292 aaKnown RBP14.31□□□□□ -0.12
MRPS28-209ENST00000522987 TTTY12Q9BZ98 90 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 KCNF1Q9H3M0 494 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 CD274Q9NZQ7 290 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 MYOTQ9UBF9 498 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 DAPP1Q9UN19 280 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 SPG11Q96JI7 2443 aa14.31□□□□□ -0.12
MRPS28-209ENST00000522987 AKAP6Q13023 2319 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 A0A088AWK7 358 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 C17orf105B2RV13 164 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 ACOT7O00154 380 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 ZSCAN12O43309 604 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 DIAPH2O60879 1101 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 PCNAP12004 261 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 TCP1P17987 556 aaKnown RBP14.3□□□□□ -0.12
MRPS28-209ENST00000522987 ZNF10P21506 573 aaPredicted RBP14.3□□□□□ -0.12
MRPS28-209ENST00000522987 CHRNB4P30926 498 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 MSH2P43246 934 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 MAGEA5P43359 124 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 RPL21P46778 160 aaKnown RBP14.3□□□□□ -0.12
MRPS28-209ENST00000522987 RIPPLY3P57055 190 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 SNTB1Q13884 538 aaKnown RBP14.3□□□□□ -0.12
MRPS28-209ENST00000522987 GXYLT1Q4G148 440 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 UBE3DQ7Z6J8 389 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 TMEM200AQ86VY9 491 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 ASB5Q8WWX0 329 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 SMC6Q96SB8 1091 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 DPH5Q9H2P9 285 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 SEMA4BQ9NPR2 832 aaPredicted RBP14.3□□□□□ -0.12
MRPS28-209ENST00000522987 PRDM7Q9NQW5 492 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 PLSCR2Q9NRY7 297 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 ALKBH4Q9NXW9 302 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 MOCS1Q9NZB8 636 aa14.3□□□□□ -0.12
MRPS28-209ENST00000522987 PPIEQ9UNP9 301 aaKnown RBP14.3□□□□□ -0.12
MRPS28-209ENST00000522987 ATP6AP2A0A1C7CYW4 349 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 CDK2AP1O14519 115 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 FANCGO15287 622 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 CTNSO60931 367 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 STK16O75716 305 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 ATP6AP2O75787 350 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 TOXO94900 526 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 LRATO95237 230 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 ETHE1O95571 254 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 TGFB1P01137 390 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 CCL3P10147 92 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 CHIT1Q13231 466 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 PDK4Q16654 411 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 ADPRMQ3LIE5 342 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 FAM47EQ6ZV65 393 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 SYDE1Q6ZW31 735 aaPredicted RBP14.29□□□□□ -0.12
MRPS28-209ENST00000522987 CREG2Q8IUH2 290 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 TMEM251Q8N6I4 163 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 ACBD4Q8NC06 268 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 LILRB4Q8NHJ6 448 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 SLC2A12Q8TD20 617 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 ANKRD7Q92527 254 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 PPWD1Q96BP3 646 aaKnown RBP14.29□□□□□ -0.12
MRPS28-209ENST00000522987 PTCD3Q96EY7 689 aaKnown RBP14.29□□□□□ -0.12
MRPS28-209ENST00000522987 KRT12Q99456 494 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 CNPPD1Q9BV87 410 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 DERL2Q9GZP9 239 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 NT5DC2Q9H857 520 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 SAYSD1Q9NPB0 183 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 KCNJ16Q9NPI9 418 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 TUBA8Q9NY65 449 aaPredicted RBP14.29□□□□□ -0.12
MRPS28-209ENST00000522987 RNF112Q9ULX5 631 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 EXPH5Q8NEV8 1989 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 KIAA1549Q9HCM3 1950 aa14.29□□□□□ -0.12
MRPS28-209ENST00000522987 HRKO00198 91 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 PRKRAO75569 313 aaKnown RBP14.28□□□□□ -0.12
MRPS28-209ENST00000522987 FAM155BO75949 473 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 WISP3O95389 354 aaPredicted RBP14.28□□□□□ -0.12
MRPS28-209ENST00000522987 CD1DP15813 335 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 EPORP19235 508 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 CAPN3P20807 821 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 PIGAP37287 484 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 GNG11P61952 73 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 RNF4P78317 190 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 IRF8Q02556 426 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 TFF3Q07654 80 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 ASPHQ12797 758 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 MYBPHQ13203 477 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 DDX39BQ13838 428 aaKnown RBP14.28□□□□□ -0.12
MRPS28-209ENST00000522987 FRG1Q14331 258 aaKnown RBP14.28□□□□□ -0.12
MRPS28-209ENST00000522987 TESK1Q15569 626 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 PAOXQ6QHF9 649 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 DGAT2L6Q6ZPD8 337 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 RTL4Q6ZR62 310 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 MORN4Q8NDC4 146 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 OR14A16Q8NHC5 309 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms